Pairwise Alignments

Query, 293 a.a., FixP3 Diheme c-type cytochrome from Sinorhizobium meliloti 1021

Subject, 325 a.a., cytochrome c oxidase subunit, cbb3-type from Pseudomonas putida KT2440

 Score =  149 bits (377), Expect = 6e-41
 Identities = 97/292 (33%), Positives = 150/292 (51%), Gaps = 32/292 (10%)

Query: 14  TTGHEWNGIKELDTPVPRGVLLFLVVTHVFALLWWVLLP---TWP------------LGT 58
           T GH ++GI+E D P+P+      V T VFAL + VL P    W               T
Sbjct: 39  TVGHAFDGIEEYDNPLPQWWFWLFVGTIVFALGYLVLYPGLGNWKGVLPGYSYLDNDKQT 98

Query: 59  TYTKGLLGIDERNVVEEKLAAAAAARAVWEKRIDTLSYEQIRADEQLMATVRSTGHQLFG 118
            ++ G  G    +  E+++A A A       +   +  E++  D Q +      G +LF 
Sbjct: 99  EFSNGQPGWTGVHEWEKEMAKADARFGPIFAKFAAMPIEEVAKDPQAL----KMGARLFA 154

Query: 119 DNCAVCHGIDGKGRSNYPDLTDDDWLWGGGPEDIEQTLRVGINTRHPESRVAQMPSFGRE 178
            NC+VCHG D KG   +P+LTD+DW WGG PE I+ T+  G        R   MP++   
Sbjct: 155 SNCSVCHGSDAKGAFGFPNLTDNDWRWGGEPETIKTTIMAG--------RHGVMPAWA-- 204

Query: 179 QMLERNQVRDVAAYVYSLTNPGYSTPENI-GRIEAGREVFLTSCAACHGENARGSREVGA 237
           +++    V DVAA+V S  + G + PE     +E G+++F  +C ACHG   +G+  +GA
Sbjct: 205 EVIGDQGVADVAAFVVSKLD-GRTLPEGAKADVENGQKIFAANCVACHGPEGKGTPAMGA 263

Query: 238 PNLTDAY-WIYGGTMQTIIESVHGGRQGHMPTWDERLTSAEIKILALYINSL 288
           PNLT    +IYG +   + +++  GRQG MP  ++   + ++ +LA Y+ SL
Sbjct: 264 PNLTHPQAFIYGSSFAQLQQTIRYGRQGQMPAQEQLQGNDKVHLLAAYVYSL 315



 Score = 51.6 bits (122), Expect = 2e-11
 Identities = 32/89 (35%), Positives = 50/89 (56%), Gaps = 13/89 (14%)

Query: 113 GHQLFGDNCAVCHGIDGKGRS--NYPDLTDDD-WLWGGGPEDIEQTLRVGINTRHPESRV 169
           G ++F  NC  CHG +GKG      P+LT    +++G     ++QT+R G        R 
Sbjct: 239 GQKIFAANCVACHGPEGKGTPAMGAPNLTHPQAFIYGSSFAQLQQTIRYG--------RQ 290

Query: 170 AQMPSFGREQMLERNQVRDVAAYVYSLTN 198
            QMP+  +EQ+   ++V  +AAYVYSL++
Sbjct: 291 GQMPA--QEQLQGNDKVHLLAAYVYSLSH 317