Pairwise Alignments

Query, 293 a.a., FixP3 Diheme c-type cytochrome from Sinorhizobium meliloti 1021

Subject, 313 a.a., cytochrome c oxidase subunit, cbb3-type from Pseudomonas putida KT2440

 Score =  145 bits (365), Expect = 1e-39
 Identities = 93/282 (32%), Positives = 147/282 (52%), Gaps = 26/282 (9%)

Query: 14  TTGHEWNGIKELDTPVPRGVLLFLVVTHVFALLWWVLLPTWPLGTTYTKGLL-----GID 68
           T GH ++GI+E D P+P+      V T  F++ + +L P    G    KG+L     G  
Sbjct: 39  TMGHSFDGIEEYDNPLPKWWFWLFVGTLAFSVGYLILYP----GLGNWKGILPGYENGWT 94

Query: 69  ERNVVEEKLAAAAAARAVWEKRIDTLSYEQIRADEQLMATVRSTGHQLFGDNCAVCHGID 128
             N  ++++  A A       +   +  E++  D Q +      G +LF  NC+VCHG D
Sbjct: 95  GANEWQKEMDKADARFGPIFAKYAAMPVEEVAKDPQAL----KMGSRLFASNCSVCHGSD 150

Query: 129 GKGRSNYPDLTDDDWLWGGGPEDIEQTLRVGINTRHPESRVAQMPSFGREQMLERNQVRD 188
            KG   +P+LTD+DW WGG PE I+ ++  G        R   MP++   +++    V D
Sbjct: 151 AKGAFGFPNLTDNDWRWGGDPETIKTSIMSG--------RHGVMPAWA--EVIGDQGVAD 200

Query: 189 VAAYVYSLTNPGYSTPENI-GRIEAGREVFLTSCAACHGENARGSREVGAPNLTDAY-WI 246
           VAA+V S  + G + PE     +E G+++F  +C ACHG   +G+  +GAPNLT    +I
Sbjct: 201 VAAFVVSKLD-GRTLPEGAKADVENGQKIFAANCVACHGPEGKGTPAMGAPNLTHPQAFI 259

Query: 247 YGGTMQTIIESVHGGRQGHMPTWDERLTSAEIKILALYINSL 288
           YG +   + +++  GRQG MP   E   + ++ +LA Y+ SL
Sbjct: 260 YGSSFAQLQQTIRYGRQGQMPAQAEIQGNDKVHLLAAYVYSL 301



 Score = 49.3 bits (116), Expect = 1e-10
 Identities = 31/91 (34%), Positives = 49/91 (53%), Gaps = 13/91 (14%)

Query: 113 GHQLFGDNCAVCHGIDGKGRS--NYPDLTDDD-WLWGGGPEDIEQTLRVGINTRHPESRV 169
           G ++F  NC  CHG +GKG      P+LT    +++G     ++QT+R G        R 
Sbjct: 225 GQKIFAANCVACHGPEGKGTPAMGAPNLTHPQAFIYGSSFAQLQQTIRYG--------RQ 276

Query: 170 AQMPSFGREQMLERNQVRDVAAYVYSLTNPG 200
            QMP+  + ++   ++V  +AAYVYSL+  G
Sbjct: 277 GQMPA--QAEIQGNDKVHLLAAYVYSLSQDG 305