Pairwise Alignments

Query, 250 a.a., cbb3-type cytochrome c oxidase subunit II from Sinorhizobium meliloti 1021

Subject, 202 a.a., cbb3-type cytochrome c oxidase subunit II from Pseudomonas simiae WCS417

 Score =  201 bits (511), Expect = 9e-57
 Identities = 110/229 (48%), Positives = 134/229 (58%), Gaps = 31/229 (13%)

Query: 6   HRKLERTAIGFVLAIILAASVGGIVEIAPLFTIDETVEDVEDMRLYTPLELAGRNIYIRE 65
           H  +E+        +++A S+GG+ +I PLF  D T + VE M+  T LEL GR++YI  
Sbjct: 3   HEVVEKNIGLLAFFMVIAVSIGGLTQIVPLFFQDVTNKPVEGMKPRTALELEGRDVYIAN 62

Query: 66  GCYACHSQMIRTLRDEVERYGPFSLAVESKYDHPMLWGSKRTGPDLARVGGKYSDFWHVA 125
           GC  CHSQMIR  R E ERYG +S+A ES +DHP LWGSKRTGPDLARVGG+YSD W  A
Sbjct: 63  GCVGCHSQMIRPFRAETERYGHYSVAGESVWDHPFLWGSKRTGPDLARVGGRYSDDWQRA 122

Query: 126 HLTNPRDVVPESNMPAYAWLARTPLRLDDLGSHLEAQRSVGVPYTDEMIENAARDAFGQA 185
           HL NPR+VVPES MPAY +L    L   D    +E  R++GVPYTDE I  AA    G+ 
Sbjct: 123 HLYNPRNVVPESKMPAYPFLVENKLDGKDTAKKMEVLRTLGVPYTDEDIAGAAAAVKGK- 181

Query: 186 VPDSEQASGVTERYGDETQVSAFDGVATRVTEMDALVAYLQVLGRLTKA 234
                                         TEMDALVAYLQ LG + K+
Sbjct: 182 ------------------------------TEMDALVAYLQGLGTIIKS 200