Pairwise Alignments

Query, 250 a.a., cbb3-type cytochrome c oxidase subunit II from Sinorhizobium meliloti 1021

Subject, 209 a.a., Cytochrome c oxidase (cbb3-type) subunit CcoO (EC 1.9.3.1) from Variovorax sp. SCN45

 Score =  216 bits (550), Expect = 3e-61
 Identities = 112/228 (49%), Positives = 138/228 (60%), Gaps = 31/228 (13%)

Query: 6   HRKLERTAIGFVLAIILAASVGGIVEIAPLFTIDETVEDVEDMRLYTPLELAGRNIYIRE 65
           H K+E   +  ++ I++  +VGG+VEI PLF    T E V+ ++  TPL+LAGR++Y+RE
Sbjct: 13  HEKIETNNLLMIVLILVVVAVGGLVEIVPLFFQKSTTEAVQGVKPLTPLQLAGRDVYLRE 72

Query: 66  GCYACHSQMIRTLRDEVERYGPFSLAVESKYDHPMLWGSKRTGPDLARVGGKYSDFWHVA 125
           GCY CHSQMIR  R E  RYG +S+A E  YDHP  WGSKRTGPDL RVGGKYSD WH  
Sbjct: 73  GCYNCHSQMIRPFRSETLRYGHYSVAGEFVYDHPFQWGSKRTGPDLHRVGGKYSDEWHRI 132

Query: 126 HLTNPRDVVPESNMPAYAWLARTPLRLDDLGSHLEAQRSVGVPYTDEMIENAARDAFGQA 185
           HL NPRDVVPESNMPAY WL +T +  + L +H+ A R VGVPY+D  I  A  +  G+ 
Sbjct: 133 HLNNPRDVVPESNMPAYTWLEKTLVDAEALPAHMRALRRVGVPYSDAEIAGATEEVRGK- 191

Query: 186 VPDSEQASGVTERYGDETQVSAFDGVATRVTEMDALVAYLQVLGRLTK 233
                                         TEM+A VAYLQ LG   K
Sbjct: 192 ------------------------------TEMEATVAYLQSLGLALK 209