Pairwise Alignments

Query, 551 a.a., cbb3-type cytochrome c oxidase subunit I from Sinorhizobium meliloti 1021

Subject, 593 a.a., alternative cytochrome C oxidase polypeptide I transmembrane protein from Sinorhizobium meliloti 1021

 Score = 58.9 bits (141), Expect = 5e-13
 Identities = 72/289 (24%), Positives = 121/289 (41%), Gaps = 31/289 (10%)

Query: 245 VSLGHAKSYTIWSGVQDSMVQWWYGHNAVAFFLTAGFLAMLYYYLPKRAERPIFSYRLSI 304
           V +G    Y   S +    + W++GH  V       F  ++   +   A + IF YR+ +
Sbjct: 257 VEMGEQLQYGGGSPILFQHLFWFFGHPEVYIVALPAF-GIVSDLISTHARKNIFGYRMMV 315

Query: 305 LSFWGITF-----FYMWAGSHHLHYTALPHWVQNLGMTFSVMLLVPSWASAGNALLTL-N 358
              W I       F +WA  HH++ + +  +      T ++++ VP+     N +LTL  
Sbjct: 316 ---WAIVIIGGLSFIVWA--HHMYVSGMNPYFGFFFATTTLIIAVPTAIKVYNWVLTLWR 370

Query: 359 GAWHKVRDDATLRFIMMAAFFYGLST--FEGSFLAVRPVNSLSHYTDWTVGHVHAGALGW 416
           G  H      TL  +   AF          G FL    V+     T + V H H      
Sbjct: 371 GNIH-----LTLPMLFALAFIVTFVNGGLTGLFLGNVVVDVPLSDTMFVVAHFHMVMGVA 425

Query: 417 VALITYGSLYTLVPAIWKRERMYSAALVEVHFWLAFAGTVIYVFAMWNSGIIQGLMWRTY 476
             ++ +G++Y   P I    RM + A+ ++HFW+ F G     F M   G+I   + R Y
Sbjct: 426 PIMVIFGAIYHWYPKI--TGRMLNEAMGQIHFWVTFIGAYAIFFPMHYLGLIG--VPRRY 481

Query: 477 TGDGTLAYSFVDSLVAMYPYYIARAFGGLLFLIGA--VVATYNIWMTVR 523
              G    SFV + +A    +I+     +  L+GA  +V  +N+  ++R
Sbjct: 482 HELGEA--SFVTTSIAELNAFIS----VMALLVGAAQIVFLFNLAWSLR 524