Pairwise Alignments

Query, 297 a.a., nitrate ABC transporter permease from Sinorhizobium meliloti 1021

Subject, 275 a.a., ABC transporter, permease protein (cluster 10, nitrate/sulfonate/bicarbonate) from Variovorax sp. SCN45

 Score =  120 bits (302), Expect = 3e-32
 Identities = 76/243 (31%), Positives = 127/243 (52%), Gaps = 8/243 (3%)

Query: 51  VTLTFFTLAWQLICSSPESSLPAPSRVLEESWELIAHPFYIGQGVDQGLFW-HVFASLQR 109
           + +  F L W+ +   P   + + + +   S  L A    IGQ +D GL W HV ASLQR
Sbjct: 31  IGIVLFLLLWEAL---PRLGIVSDAYLSPPSAVLAA----IGQLLDNGLLWKHVAASLQR 83

Query: 110 VALGYAMAAAVGVALGTLVGQSALAMRGLDPIFQVLRTVPPLAWLPLSLAAFQDGTPSAI 169
              G  +A+A GV LG L+G        +DP+ Q+ R     A  P+ +     G  S +
Sbjct: 84  SLWGLVLASAAGVVLGLLIGGFRRLAAIVDPLLQLFRQTSAFALFPVFILFLGIGELSKV 143

Query: 170 FVIFITAIWPIIINTAVGIRNIPQDYQNVAKVLRLNSFEYFGKIMLPAAAPYIFTGLRIG 229
            +IF  + WP++++T  G++ + +   N A  +  +    F K++LPA+ P IFTG+R+ 
Sbjct: 144 AIIFWASFWPVLLSTVSGVKQVDRLLVNSALSMGASRRFIFFKVVLPASLPSIFTGVRLA 203

Query: 230 IGLSWLAIVAAEMLIGGVGIGFFIWDAWNSSLISDIIVALIYVGIVGFLLDRLIALVGRA 289
              S  A+VAAEM+    G+GF   ++  +  I  +   ++ + ++G LL+ L+AL+ R 
Sbjct: 204 GAYSITALVAAEMIGAHSGLGFLTLNSQETFQIPTMYAGILMLAVLGLLLNYLLALLERH 263

Query: 290 VTR 292
           + R
Sbjct: 264 LLR 266