Pairwise Alignments

Query, 363 a.a., Leu or Leu/Val/Ile transport binding protein from Sinorhizobium meliloti 1021

Subject, 409 a.a., ABC transporter, substrate-binding protein (cluster 4, leucine/isoleucine/valine/benzoate) from Variovorax sp. SCN45

 Score =  108 bits (271), Expect = 2e-28
 Identities = 86/337 (25%), Positives = 153/337 (45%), Gaps = 12/337 (3%)

Query: 4   LFTAAALAFALASQSEAEVLIGVAGPMSGKLAWTGTQLRRGAEMAVANINAAGGVLGQQV 63
           L   +ALAF++ + +   + IGV GP +G  +  G  +R G  +A   IN +GGVLG+Q+
Sbjct: 8   LALTSALAFSMGALAADPIKIGVDGPFTGGSSSMGVSMRDGVRLAAEEINKSGGVLGRQI 67

Query: 64  RLIVADDFCDPRQALAAAEKLV-ADGAVFVIGHYCSGASIPASKIYAAAGVLQISPSSTN 122
           +LI  DD     + +  A++ V  +  V  +G+  +G ++ + + +  A +  ++  +T 
Sbjct: 68  QLIERDDEAKNERGVQIAQEFVNKEKVVAAVGYINTGVALASQRFFQDAKIPVLNNVATG 127

Query: 123 PMLTEQGHAN----VFRVCSRDDAQGHKAGNYLADHWGDSKIAILHDNTTYGKGLADETK 178
            ++T Q   +    VFR  + D  Q            G  K+AIL D+T YG+   ++ +
Sbjct: 128 SVITHQFDKDPENYVFRNAAHDSIQAPMIVEEAITRRGYKKVAILADSTNYGQLGREDLE 187

Query: 179 KQLNMRGVTEAVYQSYTPGKDDYSVEVAALQTAHIAVLYLGGYHTEAALMVRAARDRAYP 238
           + L  +G+T    + +     D + ++   + A    +   G   E A +        + 
Sbjct: 188 RALKNKGITPVAVEKFNIKDVDMTAQLLKSKEAGAEAVLTYGIGPELAQIANGMTKLGWK 247

Query: 239 VQLISGDDTATEAFGLIAGPAAEGTLF--TFV---ADPRRNAEAAEVVERFRAENFEPDS 293
           V +I     A   F   AGP  +G     TF+    +P+R A     V +F+ +N   DS
Sbjct: 248 VPIIGSWTLAMANFIDNAGPGGDGARMPQTFIQEPTNPKRKAFIDAFVGKFKPKNNRMDS 307

Query: 294 --WTLHSYGAAEIWAQAVTKANSLDLQAVIAALREDQ 328
                  Y +  + A A+ +A S D   + AAL + Q
Sbjct: 308 PVSAAQGYDSIYLLAAAIKQAGSTDGPKIKAALEDLQ 344