Pairwise Alignments

Query, 601 a.a., ABC transporter permease from Sinorhizobium meliloti 1021

Subject, 264 a.a., ABC transporter permease from Pseudomonas simiae WCS417

 Score = 78.2 bits (191), Expect = 4e-19
 Identities = 68/260 (26%), Positives = 122/260 (46%), Gaps = 31/260 (11%)

Query: 342 VVPVVILIASSLAPS-----SSALFSDWSLHYWIGASDPAIARGQAGIWNNPLILSATGV 396
           +VPV++ + + L  +     SS L  DW +  W   S          +W          +
Sbjct: 22  LVPVLMSLLAGLTRNFFVGLSSGLTFDWLIQVWQAYSPT--------VW----------L 63

Query: 397 TVGLGVTVAFSASLVGLLVAFVLARSRSGFLSAAINQISFLPLLVPGIAFGAAYVALLGA 456
           ++ L +  A    ++G+  A+ L R  + F S A  ++  LP+ +PG+A   A +   G 
Sbjct: 64  SLQLALACAVGVCVIGVPAAYALVRMNNRF-SRAFEELMVLPVAMPGLASALALLLTYGQ 122

Query: 457 PIGPLPALYGTFLLLVIAATAYLVPFAVQTGRAVIQ-QVSGDLDESARMTGAGFLRRLFA 515
                 +   ++L +++    + +PF V+   AV+Q Q    L+E+A   GAG ++R F+
Sbjct: 123 ----FGSFRSSWLFILVGHVLFTLPFLVRPVMAVMQRQQLPLLEEAAASLGAGPIKRFFS 178

Query: 516 ITVPLAIRGLSAGALIVFVKIVRDLSLVVLLFTPTMPLLSV-LAYRYASDGFTQFANALT 574
           + VP    G+ AG L+V    + + +L  +L TP    L V LA  YAS    + A+A T
Sbjct: 179 VVVPNCRAGILAGVLMVVTLSLGEFNLTWMLHTPMTKTLPVGLADSYAS-ARLEIASAYT 237

Query: 575 VVVLVISVAATLFANRLQAK 594
           ++ L++ V   +    + A+
Sbjct: 238 LIFLLMIVPLLIALQAISAR 257



 Score = 41.2 bits (95), Expect = 5e-08
 Identities = 64/253 (25%), Positives = 101/253 (39%), Gaps = 32/253 (12%)

Query: 43  AAVLVLLTALVAAPLLKVFGATLAPGAWSAWSDVLASNLSRNLFWLPLANTMILGAGVAT 102
           A +LV +   + A L + F   L+ G    W   +    S  + WL L     L    A 
Sbjct: 19  AFMLVPVLMSLLAGLTRNFFVGLSSGLTFDWLIQVWQAYSPTV-WLSLQ----LALACAV 73

Query: 103 GCVLVGGFLAWLVVMTDVPFRRTIGLLATLPFMIPSFATALAWGSLFRNARVGGQIGFLE 162
           G  ++G   A+ +V  +  F R    L  LP  +P  A+ALA    +      GQ G   
Sbjct: 74  GVCVIGVPAAYALVRMNNRFSRAFEELMVLPVAMPGLASALALLLTY------GQFGSFR 127

Query: 163 GLGFSVPDWLAWGMVPTLVVLMAH-YYSLAFTV--IAAALATVNSDLV-EAAQMTGAGRR 218
                     +W     L +L+ H  ++L F V  + A +      L+ EAA   GAG  
Sbjct: 128 S---------SW-----LFILVGHVLFTLPFLVRPVMAVMQRQQLPLLEEAAASLGAGPI 173

Query: 219 RIFLGIVLPVALPALVAGASLTFAGAVSNFAAPALLGLPVRMQTLATRLYGMIEIGQAE- 277
           + F  +V+P     ++AG  +    ++  F    +L  P+  +TL   L       + E 
Sbjct: 174 KRFFSVVVPNCRAGILAGVLMVVTLSLGEFNLTWMLHTPM-TKTLPVGLADSYASARLEI 232

Query: 278 -RGYVLAILLILV 289
              Y L  LL++V
Sbjct: 233 ASAYTLIFLLMIV 245