Pairwise Alignments

Query, 601 a.a., ABC transporter permease from Sinorhizobium meliloti 1021

Subject, 267 a.a., ABC transporter, permease protein 2 (cluster 1, maltose/g3p/polyamine/iron) from Variovorax sp. SCN45

 Score = 84.0 bits (206), Expect = 7e-21
 Identities = 75/276 (27%), Positives = 123/276 (44%), Gaps = 25/276 (9%)

Query: 325 ARLPLFVAAASICVLTTVVPVVILIASSLAPSSSALFSDWSLHYWIGASDPAIARGQAGI 384
           A+ P  +A   I  L  + P+++ + + L  + S          W+G            +
Sbjct: 8   AKAPFLLAVTLIVSLFMIAPMLLSVMAGLVNNYSVGLKSGFTLRWLGE-----------V 56

Query: 385 WNNPLILSATGVTVGLGVTVAFSASLVGLLVAFVLARSRSGFLSAAINQISFLPLLVPGI 444
           W N       G ++ L V       L+G+  A+ LARSRS   +    ++  LP+ VPG+
Sbjct: 57  WEN--YGGTVGWSLALAVACVIGTVLIGVPCAYALARSRSR-AARIFEELLTLPVAVPGL 113

Query: 445 AFGAAYVALLGAPIGPLPALYGTFLLLVIAATAYLVPFAVQTGRAVIQQVSG-DLDESAR 503
           A   A +   G     L A   +F  +++    + +PF V+T  +  ++     L+E+AR
Sbjct: 114 ATALALILAYGQ----LTAFRQSFAFILVGHIVFTLPFMVRTVSSAFERDDLLALEEAAR 169

Query: 504 MTGAGFLRRLFAITVPLAIRGLSAGALIVFVKIVRDLSLVVLLFTPTMPLLSV-LAYRYA 562
             GA F +R   I VP     + AG+L+VF   V + +L  +L TP    L V LA  YA
Sbjct: 170 SLGANFRQRFMGILVPAVFPAIVAGSLMVFTLSVGEFNLTWMLHTPLTRTLPVGLADSYA 229

Query: 563 SDGFTQFANALTV----VVLVISVAATLFANRLQAK 594
           S    +  +A T+    V+L +  A    AN +Q +
Sbjct: 230 SMRI-EIGSAYTLVFFAVILPVLWALQYLANLMQKR 264



 Score = 63.5 bits (153), Expect = 1e-14
 Identities = 69/267 (25%), Positives = 106/267 (39%), Gaps = 37/267 (13%)

Query: 41  LKAAVLVLLTALVAAPLLKV-------FGATLAPGAWSAWSDVLASNLSRNLFWLPLANT 93
           L A  L++   ++A  LL V       +   L  G    W   +  N    + W     +
Sbjct: 13  LLAVTLIVSLFMIAPMLLSVMAGLVNNYSVGLKSGFTLRWLGEVWENYGGTVGW-----S 67

Query: 94  MILGAGVATGCVLVGGFLAWLVVMTDVPFRRTIGLLATLPFMIPSFATALAWGSLFRNAR 153
           + L      G VL+G   A+ +  +     R    L TLP  +P  ATALA    +    
Sbjct: 68  LALAVACVIGTVLIGVPCAYALARSRSRAARIFEELLTLPVAVPGLATALALILAY---- 123

Query: 154 VGGQIGFLEGLGFSVPDWLAWGMVPTLVVLMAHY-YSLAFTVIAAALATVNSDLV---EA 209
            G    F +   F               +L+ H  ++L F V   + A    DL+   EA
Sbjct: 124 -GQLTAFRQSFAF---------------ILVGHIVFTLPFMVRTVSSAFERDDLLALEEA 167

Query: 210 AQMTGAGRRRIFLGIVLPVALPALVAGASLTFAGAVSNFAAPALLGLPVRMQTLATRLYG 269
           A+  GA  R+ F+GI++P   PA+VAG+ + F  +V  F    +L  P+  +TL   L  
Sbjct: 168 ARSLGANFRQRFMGILVPAVFPAIVAGSLMVFTLSVGEFNLTWMLHTPL-TRTLPVGLAD 226

Query: 270 MIEIGQAERGYVLAILLILVSAFFLWA 296
                + E G    ++   V    LWA
Sbjct: 227 SYASMRIEIGSAYTLVFFAVILPVLWA 253