Pairwise Alignments

Query, 601 a.a., ABC transporter permease from Sinorhizobium meliloti 1021

Subject, 564 a.a., ABC transporter, membrane spanning protein from Agrobacterium fabrum C58

 Score =  187 bits (475), Expect = 1e-51
 Identities = 150/549 (27%), Positives = 262/549 (47%), Gaps = 28/549 (5%)

Query: 45  VLVLLTALVAAPLLKVFGATLAPGAWSAWSDVLASNLSRNLFWLPLANTMILGAGVATGC 104
           V+ ++ AL A PL    G     G  S+ +  +   L+    W    NT+          
Sbjct: 19  VVSVVFALSALPL----GRLAYTGIVSSLNGDIWRLLADPALWDAAQNTLSTSFFGMLIS 74

Query: 105 VLVGGFLAWLVVMTDVPFRRTIGLLATLPFMIPSFATALAW-GSLFRNARVGGQIGFLEG 163
           + +GG  A  + + D+  +  +  L  LP MIP   TAL+W G    ++ +   IG    
Sbjct: 75  LAIGGAFALSLTLCDIRGKSILSFLFMLPMMIPPQVTALSWIGMTGPSSTLLKAIGLAPA 134

Query: 164 LGFSVPDWLAWGMVPTLVVLMAHYYSLAFTVIAAALATVNSDLVEAAQMTGAGRRRIFLG 223
           +G   P +   G+    ++L   +  L +  + A L  +  D +EAA+++GA  RR+   
Sbjct: 135 MGSPQPLYSIAGIA---LLLGVQHAPLVYLSLRAGLLALPQDGIEAAKLSGASPRRVLFD 191

Query: 224 IVLPVALPALVAGASLTFAGAVSNFAAPALLGLPVRMQTLATRLYG-MIEIGQAERG--Y 280
           I+LP++ P L+AGA+++F   V NF  PA+LG+P  + TL T +Y      G +  G   
Sbjct: 192 IILPLSTPGLIAGAAISFVSNVGNFGIPAILGIPGSIFTLPTLIYSRFASFGTSTFGDIA 251

Query: 281 VLAILLILVSAFFLWAGNRVISGRRSYATITGKGGRSKRFALGTARLPLFVAAASICVLT 340
           +L+ ++ ++S   L    R + GR     I G  G++  F LG  R+P  +A   + +  
Sbjct: 252 ILSTMIAIISVAGLALQERAMKGRD--YRIIGLSGKAATFGLGRWRVPAELALWLVLLFM 309

Query: 341 TVVPVVILIASSLAPSSSALFS--DWSLHYWIGASDPAIARGQAGIWNNPLILSATGVTV 398
            V P+  L+ASSLAP+     S    +LH +           +  ++   +  +A   ++
Sbjct: 310 LVAPLTALVASSLAPAYGVPLSLKTATLHAY-----------EELLYRQSVTRTAFRNSL 358

Query: 399 GLGVTVAFSASLVGLLVAFVLARSRSGFLSAAINQISFLPLLVPGIAFGAAYVALLGAPI 458
            L    +     V +L A+ L R +S F+   ++ +  +P  +PG+    ++V L  API
Sbjct: 359 FLATATSLCLLAVTVLTAYFLVRGKSRFM-FLLSALVDIPYALPGVVISVSFVLLFAAPI 417

Query: 459 GPL-PALYGTFLLLVIAATAYLVPFAVQTGRAVIQQVSGDLDESARMTGAGFLRRLFAIT 517
             L   LYGT  ++++A  +     +++   +   Q    L+E+AR++GAGF RRL  I 
Sbjct: 418 PLLGVTLYGTIWIILLAYFSSFFAVSLKPMVSAFLQFDPSLEEAARLSGAGFWRRLKDII 477

Query: 518 VPLAIRGLSAGALIVFVKIVRDLSLVVLLFTPTMPLLSVLAYRYASDGFTQFANALTVVV 577
           +PL      A  ++VF+    +L++  LL++     L VL Y     G    A+AL+V+V
Sbjct: 478 LPLVGPAAGASVILVFLIACNELTVSALLWSAGTQTLGVLIYNLDDSGSFDLASALSVLV 537

Query: 578 LVISVAATL 586
           +++ +   L
Sbjct: 538 VIMVIILML 546