Pairwise Alignments

Query, 265 a.a., ABC transporter periplasmic substrate-binding protein from Sinorhizobium meliloti 1021

Subject, 261 a.a., amino acid ABC transporter substrate-binding protein from Pseudomonas simiae WCS417

 Score =  174 bits (441), Expect = 2e-48
 Identities = 102/260 (39%), Positives = 141/260 (54%), Gaps = 2/260 (0%)

Query: 1   MTMRLKSLLLPLVGLLAITVGAATASASSLDDIIARKKVMIGVDLSVPPFGITNEEMQPD 60
           MT R  +LL  L   L ++   A A A+ LDDI+AR  + + V    PPFG    +M+P 
Sbjct: 1   MTKRYSALLTALFASLMLS--QAPAQANGLDDIVARGTLKVAVPQDFPPFGSVGPDMKPR 58

Query: 61  GLDVDVAKLLAKDLGVELELVPVTGQSRIPSLQTGKVDFVVASFGIYTERALSVAFSNPY 120
           GLD+D AKLLA  L V+LEL PV   +RIP L TGKVD V++S G   ER   + FS  Y
Sbjct: 59  GLDIDTAKLLADQLKVKLELTPVNSTNRIPFLTTGKVDLVISSLGKNAEREKVIDFSKAY 118

Query: 121 GGHRSIIIAPKEATIKSLADLAGKRVGVPRGTAHEKILSAANVEGMELVRFDDDSTTLNA 180
                 +  P EA I S  DL GK + V RG   +  L+A   +   + RF+D+++T+ A
Sbjct: 119 APFYLAVFGPPEAAISSTDDLKGKTISVTRGAIEDIELTAVAPKEATIKRFEDNNSTIAA 178

Query: 181 LVSGQVDAIGTVNYIAAQLQERYPDRGFEEKTTYLQSFYGVGLRRNDPDLLHWLNTVLFV 240
            ++GQVD I + N +   + ER P R    K     S   VG+ +N+P LL  +N +L  
Sbjct: 179 YLAGQVDLIASGNVVMVAISERSPKRVPALKVKLKDSPVYVGVNKNEPALLEKVNQILVA 238

Query: 241 HKQSGELGAIYEKWMKTPIP 260
            K  G L     +W+K P+P
Sbjct: 239 AKADGSLEKNAMQWLKEPLP 258