Pairwise Alignments

Query, 265 a.a., ABC transporter periplasmic substrate-binding protein from Sinorhizobium meliloti 1021

Subject, 284 a.a., glutamine ABC transporter substrate-binding protein from Pseudomonas simiae WCS417

 Score =  108 bits (270), Expect = 1e-28
 Identities = 82/270 (30%), Positives = 137/270 (50%), Gaps = 15/270 (5%)

Query: 5   LKSLLLPLVGLLAITVGA----------ATASASSLDDIIARKKVMIGVDLSVPPFGITN 54
           +K LLLPL  + A+  G           A A+ S++D I AR K+++GV    PPFG  N
Sbjct: 1   MKKLLLPLFAV-ALLAGCDKKAEEPTKPAAAAVSAIDRIKARDKLIVGVFTDKPPFGFVN 59

Query: 55  EEMQPDGLDVDVAKLLAKD-LGVE--LELVPVTGQSRIPSLQTGKVDFVVASFGIYTERA 111
           E  +  G D D+ +  AKD LG E  +E V V   SRIP LQ+ KVD ++A+  +  ER 
Sbjct: 60  EAGRYVGFDTDIGRQFAKDLLGDENKVEFVAVEPASRIPFLQSDKVDLILANMTVTPERK 119

Query: 112 LSVAFSNPYGGHRSIIIAPKEATIKSLADLAGKRVGVPRGTAHEKILSAANVEGMELVRF 171
            +V F+NP        + P ++ +KSL DLA +   V  GT  + I    N    +L++F
Sbjct: 120 EAVDFTNPNLKVAVQALVPNDSAVKSLNDLATRTTIVTTGTTAD-IWLTKNHPDWKLLKF 178

Query: 172 DDDSTTLNALVSGQVDAIGTVNYIAAQLQERYPDRGFEEKTTYLQSFYGVGLRRNDPDLL 231
           + +S +L AL +G+ DA    N +     ++ P     E+    ++     +++ + +L 
Sbjct: 179 EKNSESLQALSAGRGDAYAQDNLVLFSWAKQNPGYRVLEEKLGDEAPIAPAVKKGNIELR 238

Query: 232 HWLNTVLFVHKQSGELGAIYEKWMKTPIPE 261
            W+N  L    +   L  +Y+++++  + +
Sbjct: 239 DWVNAELAKLGEEKFLLKLYDQYVRKELSD 268