Pairwise Alignments

Query, 265 a.a., ABC transporter periplasmic substrate-binding protein from Sinorhizobium meliloti 1021

Subject, 258 a.a., ABC transporter, substrate-binding protein (cluster 3, basic aa/glutamine/opines) from Variovorax sp. SCN45

 Score =  135 bits (339), Expect = 1e-36
 Identities = 81/233 (34%), Positives = 128/233 (54%), Gaps = 2/233 (0%)

Query: 25  ASASSLDDIIARKKVMIGVDLSVPPFGITNEEMQPDGLDVDVAKLLAKDLGVELELVPVT 84
           A A  L DI A+  + I   +   P+G T+   +P GLDV++A+ +AK +GV+LEL  VT
Sbjct: 20  AHADKLADIKAKGAIRIATTIDAAPWGFTDAAGKPTGLDVELAENVAKAMGVKLELQQVT 79

Query: 85  GQSRIPSLQTGKVDFVVASFGIYTERALSVAFSNPYGG-HRSIIIAPKEATIKSLADLAG 143
           G +RIP L + KVD V+A+ G   ERA  VAFS PY   +  +           ++DLAG
Sbjct: 80  GANRIPYLLSNKVDVVIAALGSSPERAKQVAFSKPYAAVYLGVYGGKGTPKFAKVSDLAG 139

Query: 144 KRVGVPRGTAHEKILSAANVEGMELVRFDDDSTTLNALVSGQVDAIGTVNYIAAQLQERY 203
           + V VP+G+  +  LS     G +L+R +D ++T++A +SGQ       N+IA ++ +  
Sbjct: 140 QTVAVPKGSTPDLSLSEL-APGAKLIRLEDTASTISAFLSGQAPLFAENNFIAQKVADEN 198

Query: 204 PDRGFEEKTTYLQSFYGVGLRRNDPDLLHWLNTVLFVHKQSGELGAIYEKWMK 256
           P +G E K+    S   + ++ ++  LL  +N ++      G L A+  KW K
Sbjct: 199 PAKGIEMKSLIRISPAYMAVQPSETALLAEMNKIIDAQAADGSLAALRLKWFK 251