Pairwise Alignments

Query, 218 a.a., ABC transporter permease from Sinorhizobium meliloti 1021

Subject, 219 a.a., ABC transporter, permease protein (cluster 3, basic aa/glutamine/opines) from Variovorax sp. SCN45

 Score =  109 bits (273), Expect = 3e-29
 Identities = 57/193 (29%), Positives = 111/193 (57%), Gaps = 1/193 (0%)

Query: 19  TLTLTVLAFVGGGIMGIVLALLRIARIRAFSAITTFYMQVIQGLPLLVLLFLCYYA-PSL 77
           T+ LTVL  +    +GIVLAL+R++  +A S  +  +++  + LPL+++++  +Y  P L
Sbjct: 22  TVLLTVLTMLVAVPLGIVLALMRLSSSKALSGASQVFVEFFRNLPLILVVYWAFYVMPVL 81

Query: 78  FGIEIAALTAAAIALTINSSAFLGAIWESALRAIPKAQWESADALALTPYKTLRFVIAPQ 137
             IE +A T   +AL +N SA+    + + + +I K Q E+A A+ ++ ++ ++ V+ PQ
Sbjct: 82  MHIEFSAFTTGLVALCLNVSAYNAETFRAGINSIRKGQMEAAIAMGMSRWQAMKKVVIPQ 141

Query: 138 AIRLALPSTVGFLVQIIKQTSLASIIGFIEITRAGQLVSNATFEPLKAFLSVAALYFAVC 197
           A R  LP      V + K TSL S+I   E+      + +++F  L+   ++A +Y+ + 
Sbjct: 142 AWRRVLPVLASTWVSLFKDTSLVSVIAVGELAHVALQIRSSSFRVLEMLTAMAVIYWLMG 201

Query: 198 FPLTQLSLWLERR 210
           +P  +L  W++++
Sbjct: 202 YPQAKLVDWIQKK 214