Pairwise Alignments

Query, 218 a.a., ABC transporter permease from Sinorhizobium meliloti 1021

Subject, 218 a.a., ABC transporter, permease protein (cluster 3, basic aa/glutamine/opines) from Variovorax sp. SCN45

 Score =  186 bits (473), Expect = 2e-52
 Identities = 93/211 (44%), Positives = 139/211 (65%), Gaps = 1/211 (0%)

Query: 1   MRTFGSPEFLFIVYALRWTLTLTVLAFVGGGIMGIVLALLRIARIRAFSAITTFYMQVIQ 60
           MR     +   I+ A+RWT  L + AFV G ++ + +A+ R +R      +   Y++++Q
Sbjct: 1   MRGLSIADLWLILGAIRWTAALALTAFVIGAVIALGVAVARTSRQPWLRVLARIYVELVQ 60

Query: 61  GLPLLVLLFLCYYA-PSLFGIEIAALTAAAIALTINSSAFLGAIWESALRAIPKAQWESA 119
           G PLL +LFL Y+  P L GIEI A TAAA A ++++ AFLG IW  A+ ++PK QWE+A
Sbjct: 61  GTPLLGVLFLLYFGVPMLLGIEINAFTAAAAAFSLSAGAFLGDIWRGAIESVPKGQWEAA 120

Query: 120 DALALTPYKTLRFVIAPQAIRLALPSTVGFLVQIIKQTSLASIIGFIEITRAGQLVSNAT 179
             + L  ++ +R V+ PQA R+AL  TV +LVQ+IK TSLA+++G +E+TR+GQ+V+ +T
Sbjct: 121 SCVGLRRWQVMRHVVWPQAFRVALGPTVSYLVQLIKNTSLAALVGLVELTRSGQIVAGST 180

Query: 180 FEPLKAFLSVAALYFAVCFPLTQLSLWLERR 210
              L  F  VA  YFA+C+PL +L+L LE R
Sbjct: 181 LAHLPVFCGVALCYFAICYPLARLALSLEGR 211