Pairwise Alignments

Query, 228 a.a., ABC transporter permease from Sinorhizobium meliloti 1021

Subject, 265 a.a., ABC transporter, permease protein (cluster 3, basic aa/glutamine/opines) from Variovorax sp. SCN45

 Score =  126 bits (317), Expect = 4e-34
 Identities = 66/197 (33%), Positives = 117/197 (59%), Gaps = 1/197 (0%)

Query: 3   YTFQFGPLLNYLPQIVSGLWLTIGLSFVGIFGGIALGIFCAVMSTLSSPIPRLLVRLYVE 62
           Y + FG L +Y   ++ GL  T+  + V +  G+A+G+   +     +P     +R Y+E
Sbjct: 45  YDWDFGVLWSYRRLLLIGLAYTLVFTVVCVVLGLAIGLITGLGRLSRNPWISAPIRAYIE 104

Query: 63  VVRNTPLLVQIFVIFFGLPNI-GIRLSPLTSVFIALVLNNGGYVAEIVRGGIEATHRSQV 121
           V R TP+LVQ+   ++ LP + G+ +S + +  + L L  G + +EIVRGGI +    QV
Sbjct: 105 VFRCTPVLVQLVWFYYALPVLTGLEISAVAAATLCLSLYGGAFYSEIVRGGIISIDNGQV 164

Query: 122 EAAESLGLSYFQTLRYVILPPALEKVFTPVVSQCVLLMLSTSLVSAIGVEDLTGAAMIAS 181
           EAA +LG++  Q +R ++LP A +++  P++SQ ++ + +TSL+S + V DL     + +
Sbjct: 165 EAARALGMTRMQLMRRIVLPQAFKRMVPPLMSQSIMQLKNTSLLSVLAVPDLLYQGQVIA 224

Query: 182 SETFRTMEIYLVVAMVY 198
            ET+R +E+Y  +A+ Y
Sbjct: 225 HETYRPLELYTFIAVAY 241