Pairwise Alignments

Query, 228 a.a., ABC transporter permease from Sinorhizobium meliloti 1021

Subject, 226 a.a., ABC transporter, permease protein (cluster 3, basic aa/glutamine/opines) from Variovorax sp. SCN45

 Score =  142 bits (358), Expect = 5e-39
 Identities = 83/206 (40%), Positives = 117/206 (56%), Gaps = 2/206 (0%)

Query: 5   FQFGPLLNYL--PQIVSGLWLTIGLSFVGIFGGIALGIFCAVMSTLSSPIPRLLVRLYVE 62
           F F   L+Y   P ++ G+ +TIGL+   I  G+AL +  A+ S  S        R Y+ 
Sbjct: 2   FNFDAFLSYFVNPFLLGGVGITIGLTIATIAIGLALALPLALGSMSSHRFLSAPARFYIW 61

Query: 63  VVRNTPLLVQIFVIFFGLPNIGIRLSPLTSVFIALVLNNGGYVAEIVRGGIEATHRSQVE 122
           V R TPLLVQI +I+ GLP +G+R   LTS  +AL LN   Y++E +RGG  A  + QVE
Sbjct: 62  VFRGTPLLVQIVIIYTGLPQLGLRFDVLTSAVLALSLNEAAYLSETIRGGFSAIAKGQVE 121

Query: 123 AAESLGLSYFQTLRYVILPPALEKVFTPVVSQCVLLMLSTSLVSAIGVEDLTGAAMIASS 182
           AA++L LS F TLR V LP  L  +  P+ +    L+ +TSL S I +E+L   A +   
Sbjct: 122 AAKALSLSRFATLRLVTLPQVLRVIIPPLGNSVNGLLKATSLASVISMEELMRRAQVLMQ 181

Query: 183 ETFRTMEIYLVVAMVYVVLNFVFRAV 208
           E F  +E+Y V A  Y+VL  ++  V
Sbjct: 182 EKFEVLELYCVAACFYLVLTTLWDRV 207