Pairwise Alignments

Query, 222 a.a., hypothetical protein from Sinorhizobium meliloti 1021

Subject, 208 a.a., DNA-binding protein from Pseudomonas simiae WCS417

 Score = 86.7 bits (213), Expect = 3e-22
 Identities = 66/200 (33%), Positives = 97/200 (48%), Gaps = 13/200 (6%)

Query: 16  LSPFVPVCDAIANLFAPFAEVVLHDMASA--SVVYIAGNFSKREFGDPSN---LEEIDFK 70
           +S    + + ++  F+PF EVVLHD+     S++ I  N S R  GDP+    L  I   
Sbjct: 12  ISQLEQIAEGLSKTFSPFCEVVLHDLRDPQHSILAIHNNLSGRAAGDPTTELGLARIADP 71

Query: 71  PADVLIGPYEKTNWDGRRIKSISSVLRTASGKEVGVLCINVDVSVFENILLTLQTF--VS 128
               +I  Y+    DGR++KS S  ++ A G+ V  LC+NVD+S+F  +   L+ F  VS
Sbjct: 72  EYPQVIANYQNQFSDGRQVKSTSIGIKGAGGEYVAALCMNVDLSLFRGLQGMLEQFGSVS 131

Query: 129 LPATAGKLDSLFRDDWFERINSY-IRHWTTSRGLNISDLSRAQKKELVQALADDGAFSGK 187
                  LD    D    RI+ +  R  TT R L  +D     ++ L+Q L D G    +
Sbjct: 132 GDKLIESLDPSGADVIRARIDQFAARLATTPRALKAAD-----RRVLMQELKDSGCLDIR 186

Query: 188 NAAGYICRLLGMGRATVYNY 207
            A   +   LG+ RA VY Y
Sbjct: 187 RAMETVASHLGVSRAAVYTY 206