Pairwise Alignments

Query, 272 a.a., ABC transporter substrate-binding protein from Sinorhizobium meliloti 1021

Subject, 261 a.a., lysine / arginine / ornithine ABC transporter - periplasmic binding protein from Pseudomonas putida KT2440

 Score =  142 bits (358), Expect = 7e-39
 Identities = 86/257 (33%), Positives = 133/257 (51%), Gaps = 9/257 (3%)

Query: 11  LTGLITAVLLSAAPANADTLRVGMECTYAPFNYRTSDGKLEGYDVDVAKGISEIIGVDFE 70
           L  L  +V    + A    L++G+E  Y PF ++  DG + G+D D+   + E +     
Sbjct: 7   LGALALSVFSLVSQAAEKPLKIGIEAAYPPFAFKQPDGSIAGFDYDIGNALCEEMKTKCT 66

Query: 71  YVCQEWDGMIPALLANKFDLIIASMSITDKRKEQIDFSSPYRNSVGRIVGPVGKDLKLFD 130
           +V QE+DG+IPAL   K D I++SMSITD RK+ +DF+  Y  +  R+   V KD     
Sbjct: 67  WVEQEFDGLIPALKVRKIDAILSSMSITDDRKKSVDFTKRYYLTPARL---VMKDGTTVS 123

Query: 131 DKGQPVVGNFDGLRIGVERASTYFEWFSAKL--PKADLVLYDSNEAMYLDLKNGRVDVIM 188
           D     +    G +IGV+R S +  +    L    A +V Y +   +YLD+  GR+D  +
Sbjct: 124 DS----LDELKGKKIGVQRGSIHDRFAKEVLGAKGATVVPYGTQNEIYLDVAAGRLDGTV 179

Query: 189 TNPMKAHLSFLSGEGKGKYEFIGPEVNEPKFFGPGVGVGLRKGNDELRDKISAAIRKLIR 248
            +       FL  +    + F+GP   + K+FG G+G+ +RKG+    D+I+AAI  +  
Sbjct: 180 ADATLLEDGFLKTDAGKGFAFVGPAFTDAKYFGDGIGIAVRKGDKANVDRINAAIDAIRA 239

Query: 249 EGKLKEYALKIFPFQIH 265
            GK KE   K F F I+
Sbjct: 240 NGKYKEIESKYFNFDIY 256