Pairwise Alignments

Query, 272 a.a., ABC transporter substrate-binding protein from Sinorhizobium meliloti 1021

Subject, 250 a.a., L-lysine and D-lysine ABC transporter, substrate-binding component (from data) from Pseudomonas putida KT2440

 Score =  125 bits (314), Expect = 9e-34
 Identities = 84/260 (32%), Positives = 142/260 (54%), Gaps = 16/260 (6%)

Query: 10  SLTGLITAVLLSAAPANADTLRVGMECTYAPFNYRTSDGKLEGYDVDVAKGISEIIGVDF 69
           S+  L    LL A  A+A+TLR   E  Y PFNY  +D KL G+DVD+   + E + V+ 
Sbjct: 4   SMALLGACALLLAGAASAETLRFATEGAYPPFNYVDADNKLHGFDVDITHALCEQMKVEC 63

Query: 70  EYVCQEWDGMIPALLANKFDLIIASMSITDKRKEQIDFSSPYRNSVGRIVGPVGKDLKLF 129
             V Q+W+G+IPAL+A K+D I+ASM  T++R+++I F+  Y  +   +   V KD K+ 
Sbjct: 64  TLVAQDWEGIIPALMARKYDAIVASMIDTEERRKKIAFTDHYYRT--PLTVAVAKDSKI- 120

Query: 130 DDKGQPVVGNFDGLRIGVERAST---YFEWFSAKLPKADLVLYDSNEAMYLDLKNGRVDV 186
            D  Q    +F G  +G + +ST   Y E    K   AD+ LY + +    DL  GR+D 
Sbjct: 121 -DSAQT---DFVGYTVGAQSSSTQAIYAEDVYGK-AGADVKLYPTMDEANADLAAGRLDG 175

Query: 187 IMTNPMKAHLSFLSGEGKGKYEFIGPEVNEPKFFGPGVGVGLRKGNDELRDKISAAIRKL 246
           ++ +    H  +++  G    + +G +V + K       + +RK ++ LR +++ A++++
Sbjct: 176 VIADKFPLH-EWMNKNGGDCCKILG-DVADTK---ADAAIAVRKDDEALRQRLNTALQQI 230

Query: 247 IREGKLKEYALKIFPFQIHD 266
           +  G  ++ A K F F I++
Sbjct: 231 VANGTYQKIASKYFAFDIYN 250