Pairwise Alignments

Query, 272 a.a., ABC transporter substrate-binding protein from Sinorhizobium meliloti 1021

Subject, 281 a.a., Nopaline-binding periplasmic protein from Azospirillum sp. SherDot2

 Score =  124 bits (312), Expect = 2e-33
 Identities = 85/276 (30%), Positives = 144/276 (52%), Gaps = 25/276 (9%)

Query: 11  LTGLITAVLLSAAPANA------DTLRVGMECTYAPFNYRTSDGKLEGYDVDVAKGISEI 64
           ++ L    +++ A A A       T+R+  E  Y P+N   + GKL G++VD+   + + 
Sbjct: 5   VSALALGAMMAVAAAGAAGAKEWKTVRIASEGAYPPWNATDTSGKLTGFEVDLGNDLCKR 64

Query: 65  IGVDFEYVCQEWDGMIPALLANKFDLIIASMSITDKRKEQIDFSSPY--RNSVGRIV--G 120
           + V  E+V Q+WDG+IPAL   K+D I+++M+ITD+RK+ IDFS PY    SV  +V   
Sbjct: 65  MKVTCEFVAQDWDGIIPALQQGKYDAIMSAMTITDERKKVIDFSVPYGTEPSVFAVVTGS 124

Query: 121 PVGKDLKLFDD--------KGQPVVGN----FDGLRIGVERASTYFEWFSAKLPKADLVL 168
           P+ K L L  D        K +PV+        G  +GV+ ++   ++    LPK  +  
Sbjct: 125 PLAKALNLGADRVDLNDQGKAKPVLDKLAEALKGKSVGVQVSTIQADFMDKHLPKVTMRT 184

Query: 169 YDSNEAMYLDLKNGRVDVIMTNPMKAHLSFLSGEGKGKYEFIGPEVNEPKFFGPGVGVGL 228
           YD  +   +DL +GRVD ++ +  ++ +  +      K   +GP        G G+GVGL
Sbjct: 185 YDKIDNAGIDLGSGRVDAMLGD--RSVVEAVVKATPDKMVIVGPNF-IGGVIGEGMGVGL 241

Query: 229 RKGNDELRDKISAAIRKLIREGKLKEYALKIFPFQI 264
           RK   +L+     AI + +++G +K+ + + F + I
Sbjct: 242 RKDTADLKAMFDKAIGEALKDGTVKKLSTQHFGYDI 277