Pairwise Alignments

Query, 272 a.a., ABC transporter substrate-binding protein from Sinorhizobium meliloti 1021

Subject, 257 a.a., ABC transporter, substrate binding protein (amino acid) from Agrobacterium fabrum C58

 Score =  154 bits (388), Expect = 2e-42
 Identities = 87/249 (34%), Positives = 134/249 (53%), Gaps = 9/249 (3%)

Query: 19  LLSAAPANADTLRVGMECTYAPFNYRTSDGKLEGYDVDVAKGISEIIGVDFEYVCQEWDG 78
           LLS A    D + +G E  Y PFN   +DG L G+D+D+AK + E +  +  +V  +WDG
Sbjct: 18  LLSGAALAQDKIVIGTEGAYPPFNNLEADGTLTGFDIDIAKALCEQMKAECTFVTNDWDG 77

Query: 79  MIPALLANKFDLIIASMSITDKRKEQIDFSSPYRNSVGRIVGPVGKDLKLFDDKGQPVVG 138
           +IPAL A KFD IIASMSIT +R +++DFS  Y N+   I  P    +K  DD       
Sbjct: 78  IIPALQAKKFDAIIASMSITPERLQKVDFSKKYYNTPPAIAVPKDSPIKSIDD------- 130

Query: 139 NFDGLRIGVERASTYFEWFSAKLPKADLVLYDSNEAMYLDLKNGRVDVIMTNPMKAHLSF 198
              G  +G + ++T+  +     P AD+ +Y + +   LD+ NGR+D ++ + +      
Sbjct: 131 -LKGKSLGAQGSTTHSNYAEKHFPDADVKMYPTADEYKLDIANGRIDAVIDDIVVLSEWL 189

Query: 199 LSGEGKGKYEFIGPEVNEPKFFGPGVGVGLRKGNDELRDKISAAIRKLIREGKLKEYALK 258
            +  GK   + + P   +P+  G G G+ +RKG+  L DK +AAI  +   GK +E   K
Sbjct: 190 KTDAGK-CCKILTPLKVDPEINGNGAGIAVRKGDTALADKFTAAIAGIRASGKYQEINKK 248

Query: 259 IFPFQIHDD 267
            F F ++ D
Sbjct: 249 YFDFDVYGD 257