Pairwise Alignments

Query, 611 a.a., ABC transporter ATP-binding protein from Sinorhizobium meliloti 1021

Subject, 546 a.a., ABC transporter, ATP-binding protein (cluster 5, nickel/peptides/opines) / ABC transporter, ATP-binding protein (cluster 5, nickel/peptides/opines) from Variovorax sp. SCN45

 Score =  308 bits (788), Expect = 5e-88
 Identities = 223/604 (36%), Positives = 323/604 (53%), Gaps = 87/604 (14%)

Query: 9   PLLKVEGLAISHGDVPITLPLEIVVERGETIAIVGESGSGKSLTARAIVGILPPGINAKG 68
           PL+ V+GL ++ G   +   ++  +  GE +A+VGESGSGK++TA +++ ++    +  G
Sbjct: 11  PLIDVKGLRVAFGGKEVVHGIDFQIAAGEKLALVGESGSGKTVTALSLLRLVQ-NADVTG 69

Query: 69  AVTLDGVP-------LMRLAERELRTIRGSRVSMLMQDPFTMLNPLMRSGDHIDEMLRDR 121
              L G         L+ + ERELR IRG  ++M+ Q+P T LN L   GD I E+L   
Sbjct: 70  EARLYGAERQQAPRDLLSIPERELRGIRGKEIAMIFQEPMTALNALYSVGDQIAEVLELH 129

Query: 122 PEFASRAVRADEVKRRLAEVGIVDEDV-ARRMPFQLSGGMCQRVALAAALARDPELLIAD 180
              ++RA +A  V+  LA+ GI +    AR  P QLSGG  QR  +A ALA  P LL+AD
Sbjct: 130 EALSARAAQAAAVQL-LADTGIPEPARRARAFPHQLSGGQRQRAMIAMALACKPRLLLAD 188

Query: 181 EPSTALDVTTQAEIIKLLRRIQRERNMAVILITHNLRLAFSTCQRIYVLYAGSMLEVGDA 240
           EP+TALDVT +A+I+ LL  +Q +  MAV+LITH+L L      R+ V+  G ++E G  
Sbjct: 189 EPTTALDVTVRAQILDLLADLQHKYGMAVLLITHDLNLVRRFADRVVVMENGHVVEHGAV 248

Query: 241 AAVERQPFHPYTLGLLLSEPPVDIRVPRLVAIRGSVPRAADVIDSCGFADRCEWAKQICR 300
           A V   P HPYT  L+ S P  D+      A++ S P A  V+++       +  + I  
Sbjct: 249 APVFDAPQHPYTRKLIDSHPTRDV-----AAVQAS-PAAVPVLEA-------KALRVIYP 295

Query: 301 AGKPSLAARDASRFTACIRQDEIQGELDALRSATLSATPETPRRGGTAGALVHVDALVKT 360
             KP +                 +GE  A++ A     P     G T G           
Sbjct: 296 VPKPGIGGWFR------------KGEFVAVQGADFRIVP-----GETLG----------- 327

Query: 361 FAGRRGRPICAIRDVSLHIMAGESVGLVGESGSGKTTIGRCLVGLETPTDGDIRINGIAA 420
                              + GES       GSGK+T+    +GL     G ++   IA 
Sbjct: 328 -------------------VVGES-------GSGKSTLALAALGL-LKHQGALK---IAG 357

Query: 421 ADFGAMAKADRDRVRRTIQMIFQDPYSTLNPKHSVGQALREALGASAGAPS-PAPQERIA 479
            D+ A+ +A    +RR +Q++FQDP+S+L+P+ +V Q + E L   A      A + R  
Sbjct: 358 KDW-AVDRASDLGLRRVMQVVFQDPFSSLSPRMTVEQIVGEGLRVHAPELGVEARRARSL 416

Query: 480 SLLAEVGLS----AAYATRRPASLSGGERQRVAIARALAVKPAILVCDEPVSALDVSVQA 535
           + LA+VGL+     +   R P   SGG+RQR+AIARAL V P +LV DEP SALDV++Q 
Sbjct: 417 AALADVGLTESQFPSLLDRYPHEFSGGQRQRLAIARALIVDPQLLVLDEPTSALDVTIQK 476

Query: 536 QVLNLFRRLQVEHELSYLFITHDLAVVRQIAERIYVLYLGEIVEEGPTERVISNPQHPYT 595
           QVL L +RLQ E  LSYL ITHD+ V+R +A ++ V+  G I+E GP ERV+  P+HPYT
Sbjct: 477 QVLGLLQRLQRERGLSYLLITHDVEVIRAMAHQVIVMKDGAILETGPVERVLGAPEHPYT 536

Query: 596 RRLI 599
           ++L+
Sbjct: 537 KKLV 540



 Score =  167 bits (424), Expect = 8e-46
 Identities = 106/264 (40%), Positives = 147/264 (55%), Gaps = 14/264 (5%)

Query: 347 TAGALVHVDALVKTFAGRRGRPICAIRDVSLHIMAGESVGLVGESGSGKTTIGRCLVGLE 406
           T   L+ V  L   F G+       +  +   I AGE + LVGESGSGKT     L+ L 
Sbjct: 8   TGQPLIDVKGLRVAFGGKE-----VVHGIDFQIAAGEKLALVGESGSGKTVTALSLLRLV 62

Query: 407 TPTD--GDIRINGI----AAADFGAMAKADRDRVR-RTIQMIFQDPYSTLNPKHSVGQAL 459
              D  G+ R+ G     A  D  ++ + +   +R + I MIFQ+P + LN  +SVG  +
Sbjct: 63  QNADVTGEARLYGAERQQAPRDLLSIPERELRGIRGKEIAMIFQEPMTALNALYSVGDQI 122

Query: 460 REALGASAGAPSPAPQERIASLLAEVGLS--AAYATRRPASLSGGERQRVAIARALAVKP 517
            E L       + A Q     LLA+ G+   A  A   P  LSGG+RQR  IA ALA KP
Sbjct: 123 AEVLELHEALSARAAQAAAVQLLADTGIPEPARRARAFPHQLSGGQRQRAMIAMALACKP 182

Query: 518 AILVCDEPVSALDVSVQAQVLNLFRRLQVEHELSYLFITHDLAVVRQIAERIYVLYLGEI 577
            +L+ DEP +ALDV+V+AQ+L+L   LQ ++ ++ L ITHDL +VR+ A+R+ V+  G +
Sbjct: 183 RLLLADEPTTALDVTVRAQILDLLADLQHKYGMAVLLITHDLNLVRRFADRVVVMENGHV 242

Query: 578 VEEGPTERVISNPQHPYTRRLIES 601
           VE G    V   PQHPYTR+LI+S
Sbjct: 243 VEHGAVAPVFDAPQHPYTRKLIDS 266