Pairwise Alignments

Query, 611 a.a., ABC transporter ATP-binding protein from Sinorhizobium meliloti 1021

Subject, 593 a.a., peptide transport ATP-binding ABC transporter protein from Sinorhizobium meliloti 1021

 Score =  324 bits (830), Expect = 7e-93
 Identities = 212/608 (34%), Positives = 327/608 (53%), Gaps = 77/608 (12%)

Query: 8   SPLLKVEGLAISHGDVPITLPLEIVVER-------GETIAIVGESGSGKSLTARAIVGIL 60
           S LL V+ L +    V      ++VVER       G T+ + GESGSGKS+TA +++ +L
Sbjct: 3   SSLLSVKDLTVQ---VATPTGPKVVVERLSFDLLPGRTLCLAGESGSGKSMTALSLMQLL 59

Query: 61  PPGIN--AKGAVTLDGVPLMRLAERELRTIRGSRVSMLMQDPFTMLNPLMRSGDHIDEML 118
           P  +   A G+ TLDG  ++ L E  +R IRG ++ M+ Q+P T LNP+M  G+ +   +
Sbjct: 60  PKPMARIAGGSATLDGEDILALPEARMRRIRGRKIGMIFQEPMTSLNPVMTVGNQLIGAI 119

Query: 119 RDRPEFASRAVRADEVKRRLAEVGIVDEDVARRM---PFQLSGGMCQRVALAAALARDPE 175
                 + R          L +V I + +  RR+   P +LSGG+ QR+ +A ALA++P+
Sbjct: 120 TAHGNTSGRRAARARAAELLDQVQIPEPE--RRLGQYPHELSGGLRQRIVIAMALAQNPK 177

Query: 176 LLIADEPSTALDVTTQAEIIKLLRRIQRERNMAVILITHNLRLAFSTCQRIYVLYAGSML 235
           +LIADEP+TALDVT QA+I+ L+R++Q +  ++VI+ITH++ +       + V+  G  +
Sbjct: 178 ILIADEPTTALDVTVQAQILALIRKLQADHGISVIMITHDMGVVAEMADEVLVMKHGRTV 237

Query: 236 EVGDAAAVERQPFHPYTLGLLLSEPPVDIRVPRLVAIRGS-VPRAADVIDSCGFADRCEW 294
           E   +  +   P   YT  LL +       VPRL  + G+  P+ A              
Sbjct: 238 EHATSRDLFAHPQDAYTKELLSA-------VPRLGEMAGTETPKRA-------------- 276

Query: 295 AKQICRAGKPSLAARDASRFTACIRQDEIQGELDALRSATLSATPETPRRGGTAGALVHV 354
                 AGK   A  +       ++ + +    D               +GG        
Sbjct: 277 ------AGKAVEAGSEPGAEQPMLQVENLTVRFDI--------------KGG-------- 308

Query: 355 DALVKTFAGRRGRPICAIRDVSLHIMAGESVGLVGESGSGKTTIGRCLVGLETPTDGDIR 414
                    R  R + A+  +SL +  GE++ LVGESG GK+T G+ L+ L  P  GDIR
Sbjct: 309 ------ILQRPVRRLHAVEGISLSVRRGETLSLVGESGCGKSTTGKALLNL-VPWTGDIR 361

Query: 415 INGIAAADFGAMAKADRDRVRRTIQMIFQDPYSTLNPKHSVGQALREALGASAGAPSPAP 474
           ++G +      +  +    + R +QMIFQDPY++L+P+  VG  + E L     A     
Sbjct: 362 VDGRSTR---GLRGSTMRPILRDVQMIFQDPYASLDPRMRVGDLVAEPLVIHGLASGSEL 418

Query: 475 QERIASLLAEVGLSAAYATRRPASLSGGERQRVAIARALAVKPAILVCDEPVSALDVSVQ 534
           ++R+  L   VGLS     R P   SGG+RQR+ IARAL++ P ++V DE V+ALDVS+Q
Sbjct: 419 RDRVEYLFKRVGLSPEQMKRYPHEFSGGQRQRICIARALSLSPKLIVADESVAALDVSIQ 478

Query: 535 AQVLNLFRRLQVEHELSYLFITHDLAVVRQIAERIYVLYLGEIVEEGPTERVISNPQHPY 594
           AQVL+L + +Q E  +SYLFI+HD+AVV QI+ R+ V+Y+G  VE G   ++  +PQHPY
Sbjct: 479 AQVLDLLQDIQDETGVSYLFISHDMAVVEQISHRVAVMYMGRFVEMGTRRQIFESPQHPY 538

Query: 595 TRRLIESI 602
           T++L+ ++
Sbjct: 539 TKKLMAAV 546



 Score =  146 bits (369), Expect = 2e-39
 Identities = 101/296 (34%), Positives = 156/296 (52%), Gaps = 36/296 (12%)

Query: 5   GQESPLLKVEGLAISH---GDV---PITL-----PLEIVVERGETIAIVGESGSGKSLTA 53
           G E P+L+VE L +     G +   P+        + + V RGET+++VGESG GKS T 
Sbjct: 288 GAEQPMLQVENLTVRFDIKGGILQRPVRRLHAVEGISLSVRRGETLSLVGESGCGKSTTG 347

Query: 54  RAIVGILPPGINAKGAVTLDGVPLMRLAERELRTIRGSR-------VSMLMQDPFTMLNP 106
           +A++ ++P      G + +DG        R  R +RGS        V M+ QDP+  L+P
Sbjct: 348 KALLNLVP----WTGDIRVDG--------RSTRGLRGSTMRPILRDVQMIFQDPYASLDP 395

Query: 107 LMRSGDHIDEMLRDRPEFASRAVRADEVKRRLAEVGIVDEDVARRMPFQLSGGMCQRVAL 166
            MR GD + E L      AS +   D V+     VG+  E + +R P + SGG  QR+ +
Sbjct: 396 RMRVGDLVAEPLVIHG-LASGSELRDRVEYLFKRVGLSPEQM-KRYPHEFSGGQRQRICI 453

Query: 167 AAALARDPELLIADEPSTALDVTTQAEIIKLLRRIQRERNMAVILITHNLRLAFSTCQRI 226
           A AL+  P+L++ADE   ALDV+ QA+++ LL+ IQ E  ++ + I+H++ +      R+
Sbjct: 454 ARALSLSPKLIVADESVAALDVSIQAQVLDLLQDIQDETGVSYLFISHDMAVVEQISHRV 513

Query: 227 YVLYAGSMLEVGDAAAVERQPFHPYTLGLLLSEPPVDIRVPRLVAIRGSVPRAADV 282
            V+Y G  +E+G    +   P HPYT  L+ + P  D    R    R  VP+A D+
Sbjct: 514 AVMYMGRFVEMGTRRQIFESPQHPYTKKLMAAVPVADPGRVR----RDFVPKAEDL 565



 Score =  144 bits (362), Expect = 1e-38
 Identities = 94/245 (38%), Positives = 138/245 (56%), Gaps = 10/245 (4%)

Query: 368 PICAIRDVSLHIMAGESVGLVGESGSGKTTIGRCLVGLETPTDGDIRINGIAAA----DF 423
           P   +  +S  ++ G ++ L GESGSGK+     L+ L        RI G +A     D 
Sbjct: 21  PKVVVERLSFDLLPGRTLCLAGESGSGKSMTALSLMQLLPKPMA--RIAGGSATLDGEDI 78

Query: 424 GAMAKADRDRVR-RTIQMIFQDPYSTLNPKHSVGQALREALGASAGAPSP-APQERIASL 481
            A+ +A   R+R R I MIFQ+P ++LNP  +VG  L  A+ A        A + R A L
Sbjct: 79  LALPEARMRRIRGRKIGMIFQEPMTSLNPVMTVGNQLIGAITAHGNTSGRRAARARAAEL 138

Query: 482 LAEVGLSAAYAT--RRPASLSGGERQRVAIARALAVKPAILVCDEPVSALDVSVQAQVLN 539
           L +V +        + P  LSGG RQR+ IA ALA  P IL+ DEP +ALDV+VQAQ+L 
Sbjct: 139 LDQVQIPEPERRLGQYPHELSGGLRQRIVIAMALAQNPKILIADEPTTALDVTVQAQILA 198

Query: 540 LFRRLQVEHELSYLFITHDLAVVRQIAERIYVLYLGEIVEEGPTERVISNPQHPYTRRLI 599
           L R+LQ +H +S + ITHD+ VV ++A+ + V+  G  VE   +  + ++PQ  YT+ L+
Sbjct: 199 LIRKLQADHGISVIMITHDMGVVAEMADEVLVMKHGRTVEHATSRDLFAHPQDAYTKELL 258

Query: 600 ESIVR 604
            ++ R
Sbjct: 259 SAVPR 263