Pairwise Alignments

Query, 611 a.a., ABC transporter ATP-binding protein from Sinorhizobium meliloti 1021

Subject, 616 a.a., ABC transporter permease from Agrobacterium fabrum C58

 Score =  353 bits (905), Expect = e-101
 Identities = 233/613 (38%), Positives = 337/613 (54%), Gaps = 72/613 (11%)

Query: 5   GQESPLLKVEGLAISH----GDVPITLPLEIVVERGETIAIVGESGSGKSLTARAIVGIL 60
           G  SP+L V+ L  S     G   +   +   +   ET+AIVGESGSGKS+T+ +I+ +L
Sbjct: 13  GSVSPVLSVQNLTTSFRVDGGWKSVVRNMSFDIAPRETVAIVGESGSGKSVTSLSIMRLL 72

Query: 61  PPGINA-KGAVTLDGVPLMRLAERELRTIRGSRVSMLMQDPFTMLNPLMRSGDHIDEMLR 119
               +  +G V L G  L+ L E E+R +RG  +SM+ Q+P T LNP+   G  I E L 
Sbjct: 73  DRKTSRIEGKVMLGGRDLLALPEEEMRKVRGKDISMIFQEPMTSLNPIFPIGKQIAEALT 132

Query: 120 DRPEFASRAVRADEVKRRLAEVGIVDEDVARRM---PFQLSGGMCQRVALAAALARDPEL 176
              + +S A +A EV R L +V I   + A R    P Q SGGM QRV +A ALA  P+L
Sbjct: 133 VHQDISSSAAKA-EVIRLLEKVRI--PNAASRFGDYPHQFSGGMRQRVMIAMALASKPKL 189

Query: 177 LIADEPSTALDVTTQAEIIKLLRRIQRERNMAVILITHNLRLAFSTCQRIYVLYAGSMLE 236
           LIADEP+TALDVT Q +I+ L++++Q E  M+V+ ITH++ +      R  V++ G ++E
Sbjct: 190 LIADEPTTALDVTIQGQILDLIKQLQEEEGMSVLFITHDMGVVAEVADRTIVMFRGDVVE 249

Query: 237 VGDAAAVERQPFHPYTLGLLLSEPPVDIRVPRLVAIRGSV-PRAADVID-SCGFADRCEW 294
            G    +  +  HPYT  LL +       VP+L ++R  + P    +ID   G +     
Sbjct: 250 TGTTDDIFHRGQHPYTRALLSA-------VPKLGSMRSRLLPARFPIIDIKTGESPPVVE 302

Query: 295 AKQICRAGK-PSLAARD-ASRFTACIRQDEIQGELDALRSATLSATPETPRRGGTAGALV 352
            K     GK P L+ +D  +RF               +RS                    
Sbjct: 303 TKDTVSGGKTPILSVKDLTTRFD--------------IRSGLF----------------- 331

Query: 353 HVDALVKTFAGRRGRPICAIRDVSLHIMAGESVGLVGESGSGKTTIGRCLVGLETPTDGD 412
                     GR+   + A+  VS  +  GE++ LVGESG GK+T GR +  L  PT G+
Sbjct: 332 ----------GRKSGAVHAVEKVSFDLAEGETLSLVGESGCGKSTTGRSITRLIEPTSGN 381

Query: 413 IRINGIAAADFGAMAKADRDRVR---RTIQMIFQDPYSTLNPKHSVGQALREALGASAGA 469
           + ++G        + K DR  +R   R++QM+FQDP+++L+P+ SVG A+ E        
Sbjct: 382 VTLDGYE------VLKLDRTTLRTMRRSVQMVFQDPFASLDPRMSVGTAIMEPFMEHRLG 435

Query: 470 PSPAPQERIASLLAEVGLSAAYATRRPASLSGGERQRVAIARALAVKPAILVCDEPVSAL 529
                +E+ A LL +VGLS     R P   SGG+RQR+AIAR+L + P ++V DE VSAL
Sbjct: 436 QKAQAREKAADLLEKVGLSPDMMKRFPHEFSGGQRQRIAIARSLMLDPKVIVADEAVSAL 495

Query: 530 DVSVQAQVLNLFRRLQVEHELSYLFITHDLAVVRQIAERIYVLYLGEIVEEGPTERVISN 589
           DVS++AQV NL   LQ    L++LFI+HD+AVV +++ R+ V+YLGEIVE GP   V  N
Sbjct: 496 DVSIKAQVCNLLLDLQQSLNLAFLFISHDMAVVERVSHRVAVMYLGEIVEIGPRAAVFDN 555

Query: 590 PQHPYTRRLIESI 602
           PQHPYT++L+ ++
Sbjct: 556 PQHPYTKKLMSAV 568



 Score =  169 bits (427), Expect = 4e-46
 Identities = 106/284 (37%), Positives = 163/284 (57%), Gaps = 13/284 (4%)

Query: 335 LSATPETPRRGGTAGALVHVDALVKTFAGRRGRPICAIRDVSLHIMAGESVGLVGESGSG 394
           L A     + GG+   ++ V  L  +F    G     +R++S  I   E+V +VGESGSG
Sbjct: 2   LLAATSMEQTGGSVSPVLSVQNLTTSFRVDGGWK-SVVRNMSFDIAPRETVAIVGESGSG 60

Query: 395 KT----TIGRCLVGLETPTDGDIRINGIAAADFGAMAKADRDRVR-RTIQMIFQDPYSTL 449
           K+    +I R L    +  +G + + G    D  A+ + +  +VR + I MIFQ+P ++L
Sbjct: 61  KSVTSLSIMRLLDRKTSRIEGKVMLGG---RDLLALPEEEMRKVRGKDISMIFQEPMTSL 117

Query: 450 NPKHSVGQALREALGASAGAPSPAPQERIASLLAEVGLSAAYATR---RPASLSGGERQR 506
           NP   +G+ + EAL       S A +  +  LL +V +  A A+R    P   SGG RQR
Sbjct: 118 NPIFPIGKQIAEALTVHQDISSSAAKAEVIRLLEKVRIPNA-ASRFGDYPHQFSGGMRQR 176

Query: 507 VAIARALAVKPAILVCDEPVSALDVSVQAQVLNLFRRLQVEHELSYLFITHDLAVVRQIA 566
           V IA ALA KP +L+ DEP +ALDV++Q Q+L+L ++LQ E  +S LFITHD+ VV ++A
Sbjct: 177 VMIAMALASKPKLLIADEPTTALDVTIQGQILDLIKQLQEEEGMSVLFITHDMGVVAEVA 236

Query: 567 ERIYVLYLGEIVEEGPTERVISNPQHPYTRRLIESIVRSAIQRA 610
           +R  V++ G++VE G T+ +    QHPYTR L+ ++ +    R+
Sbjct: 237 DRTIVMFRGDVVETGTTDDIFHRGQHPYTRALLSAVPKLGSMRS 280



 Score =  155 bits (392), Expect = 5e-42
 Identities = 95/270 (35%), Positives = 149/270 (55%), Gaps = 17/270 (6%)

Query: 5   GQESPLLKVEGLAI-----------SHGDVPITLPLEIVVERGETIAIVGESGSGKSLTA 53
           G ++P+L V+ L               G V     +   +  GET+++VGESG GKS T 
Sbjct: 309 GGKTPILSVKDLTTRFDIRSGLFGRKSGAVHAVEKVSFDLAEGETLSLVGESGCGKSTTG 368

Query: 54  RAIVGILPPGINAKGAVTLDGVPLMRLAERELRTIRGSRVSMLMQDPFTMLNPLMRSGDH 113
           R+I  ++ P     G VTLDG  +++L    LRT+R S V M+ QDPF  L+P M  G  
Sbjct: 369 RSITRLIEP---TSGNVTLDGYEVLKLDRTTLRTMRRS-VQMVFQDPFASLDPRMSVGTA 424

Query: 114 IDEMLRDRPEFASRAVRADEVKRRLAEVGIVDEDVARRMPFQLSGGMCQRVALAAALARD 173
           I E   +      +A   ++    L +VG+   D+ +R P + SGG  QR+A+A +L  D
Sbjct: 425 IMEPFMEH-RLGQKAQAREKAADLLEKVGL-SPDMMKRFPHEFSGGQRQRIAIARSLMLD 482

Query: 174 PELLIADEPSTALDVTTQAEIIKLLRRIQRERNMAVILITHNLRLAFSTCQRIYVLYAGS 233
           P++++ADE  +ALDV+ +A++  LL  +Q+  N+A + I+H++ +      R+ V+Y G 
Sbjct: 483 PKVIVADEAVSALDVSIKAQVCNLLLDLQQSLNLAFLFISHDMAVVERVSHRVAVMYLGE 542

Query: 234 MLEVGDAAAVERQPFHPYTLGLLLSEPPVD 263
           ++E+G  AAV   P HPYT  L+ + P  D
Sbjct: 543 IVEIGPRAAVFDNPQHPYTKKLMSAVPVPD 572