Pairwise Alignments

Query, 611 a.a., ABC transporter ATP-binding protein from Sinorhizobium meliloti 1021

Subject, 544 a.a., peptide ABC transporter ATPase from Agrobacterium fabrum C58

 Score =  225 bits (573), Expect = 4e-63
 Identities = 195/617 (31%), Positives = 285/617 (46%), Gaps = 117/617 (18%)

Query: 7   ESPLLKVEGLA--ISHGDVPITLPLEIVVERGETIAIVGESGSGKSLTARAIVGILPPGI 64
           ++ LL V GL+  ++     +   +   +  GE   IVGESGSGK+L  RA++ +LPP I
Sbjct: 3   DNTLLTVRGLSLEVAGSGHRVVKDVSFDIAPGEIFGIVGESGSGKTLATRALISLLPPAI 62

Query: 65  NAKGAVTLDGVPLMRLAERELRTIRGSRVSMLMQDPFTMLNPLMRSGDHIDEMLRDRPEF 124
                                  + G  V    QD  ++                     
Sbjct: 63  ----------------------AVTGGSVIYKGQDVMSL--------------------- 79

Query: 125 ASRAVRADEVKR-RLAEVGIVDEDVARRMPFQLSGGMCQRVALAAALARDPELLIADEPS 183
                 A E++R R AE+G+V ++    +   ++ G      L       PE        
Sbjct: 80  -----PARELRRLRGAEIGVVFQEPMTSLNPSMTIGRQLEEGLILHTKLSPE-------- 126

Query: 184 TALDVTTQAEIIKLLRRIQ-RERNMAVILITHNLRLAFSTCQRIYVLYAGSMLEVGDAAA 242
                  + +I+++LRR+  R+   A+    H     FS   R  ++ A  ML       
Sbjct: 127 -----ERREKILEMLRRVGIRDPEGALAAYPHE----FSGGMRQRIMLASVML------- 170

Query: 243 VERQPFHPYTLGLLLSEPPVDIRVPRLVAIRGSVPRAADVIDSCGFADRCEWAKQICRAG 302
                       LL+++ P         A+   + R  DV++      R E    +  + 
Sbjct: 171 --------LKPALLIADEPT-------TALDAVIQR--DVMELMVELTRAEGTAVLLISH 213

Query: 303 KPSLAARDASRFT-----ACIRQDEIQGELDALR----SATLSATP--ETPRRGGTAGA- 350
              + AR  SR       A + Q   +  LDA R       LS+ P    PR   T+ A 
Sbjct: 214 DLPMVARYTSRIVVMEKGAIVEQGRTEDLLDAPRHPYTKKLLSSLPFRGEPRSIDTSKAP 273

Query: 351 LVHVDALVKTFAGRRG-----RPICAIRDVSLHIMAGESVGLVGESGSGKTTIGRCLVGL 405
           +V    +V  +AGR+      +P  A+  VS+ I  GE V LVG SGSGKTT+GR + GL
Sbjct: 274 MVSARGIVVDYAGRKSLLKKAKPKRALHGVSIDIHEGEVVALVGGSGSGKTTLGRTIAGL 333

Query: 406 ETPTDGDIRINGIAAADFGAMAKADRDRVRRTIQMIFQDPYSTLNPKHSVGQALREALGA 465
              ++G IR  G    +       D +  R   QM+FQDPYS+L+P+ ++   + EAL  
Sbjct: 334 VKESEGHIRFQGRERNE-------DWNDYRLNCQMVFQDPYSSLDPRMTIQALVEEALRL 386

Query: 466 SAGAPSPAPQERIASLLAEVGLSAAYATRRPASLSGGERQRVAIARALAVKPAILVCDEP 525
             G    A ++R    L EVGL   YA R P  LSGG+RQRVAIARA+A +P  L+ DEP
Sbjct: 387 VPGLDQAAKRKRALETLEEVGLGVDYAGRYPHELSGGQRQRVAIARAIARRPRFLIADEP 446

Query: 526 VSALDVSVQAQVLNLFRRLQVEHELSYLFITHDLAVVRQIAERIYVLYLGEIVEEGPTER 585
           VSALDV+V+AQVL+LF  LQ  +  S LFI+HDL VV Q+A+R+ V+  G I+EEG  + 
Sbjct: 447 VSALDVTVRAQVLDLFSDLQKRYGFSCLFISHDLGVVEQVADRVVVMQDGRIIEEGDRDT 506

Query: 586 VISNPQHPYTRRLIESI 602
           +  +P+  YTRRL+ +I
Sbjct: 507 IFDSPREAYTRRLLSAI 523



 Score =  148 bits (373), Expect = 7e-40
 Identities = 97/267 (36%), Positives = 141/267 (52%), Gaps = 21/267 (7%)

Query: 347 TAGALVHVDALVKTFAGRRGRPICAIRDVSLHIMAGESVGLVGESGSGKTTIGRCLVGLE 406
           T   L+ V  L    AG   R    ++DVS  I  GE  G+VGESGSGKT   R L+ L 
Sbjct: 2   TDNTLLTVRGLSLEVAGSGHR---VVKDVSFDIAPGEIFGIVGESGSGKTLATRALISLL 58

Query: 407 TP----TDGDIRINGIAAADFGAMAKADRDRVRRT-IQMIFQDPYSTLNPKHSVGQALRE 461
            P    T G +   G    D  ++   +  R+R   I ++FQ+P ++LNP  ++G+ L E
Sbjct: 59  PPAIAVTGGSVIYKG---QDVMSLPARELRRLRGAEIGVVFQEPMTSLNPSMTIGRQLEE 115

Query: 462 ALGASAGAPSPAPQERIASLLAEVGLS------AAYATRRPASLSGGERQRVAIARALAV 515
            L           +E+I  +L  VG+       AAY    P   SGG RQR+ +A  + +
Sbjct: 116 GLILHTKLSPEERREKILEMLRRVGIRDPEGALAAY----PHEFSGGMRQRIMLASVMLL 171

Query: 516 KPAILVCDEPVSALDVSVQAQVLNLFRRLQVEHELSYLFITHDLAVVRQIAERIYVLYLG 575
           KPA+L+ DEP +ALD  +Q  V+ L   L      + L I+HDL +V +   RI V+  G
Sbjct: 172 KPALLIADEPTTALDAVIQRDVMELMVELTRAEGTAVLLISHDLPMVARYTSRIVVMEKG 231

Query: 576 EIVEEGPTERVISNPQHPYTRRLIESI 602
            IVE+G TE ++  P+HPYT++L+ S+
Sbjct: 232 AIVEQGRTEDLLDAPRHPYTKKLLSSL 258



 Score =  127 bits (318), Expect = 2e-33
 Identities = 87/259 (33%), Positives = 132/259 (50%), Gaps = 17/259 (6%)

Query: 5   GQESPLLKVEGLAISHGDVPITLPLEIVVERGETIAIVGESGSGKSLTARAIVGILPPGI 64
           G++S L K +     HG       + I +  GE +A+VG SGSGK+   R I G++    
Sbjct: 286 GRKSLLKKAKPKRALHG-------VSIDIHEGEVVALVGGSGSGKTTLGRTIAGLVK--- 335

Query: 65  NAKGAVTLDGVPLMRLAERELRTIRGSRVSMLMQDPFTMLNPLMRSGDHIDEMLRDRPEF 124
            ++G +   G    R    +    R     M+ QDP++ L+P M     ++E LR  P  
Sbjct: 336 ESEGHIRFQG----RERNEDWNDYR-LNCQMVFQDPYSSLDPRMTIQALVEEALRLVPGL 390

Query: 125 ASRAVRADEVKRRLAEVGIVDEDVARRMPFQLSGGMCQRVALAAALARDPELLIADEPST 184
             +A +       L EVG+   D A R P +LSGG  QRVA+A A+AR P  LIADEP +
Sbjct: 391 -DQAAKRKRALETLEEVGL-GVDYAGRYPHELSGGQRQRVAIARAIARRPRFLIADEPVS 448

Query: 185 ALDVTTQAEIIKLLRRIQRERNMAVILITHNLRLAFSTCQRIYVLYAGSMLEVGDAAAVE 244
           ALDVT +A+++ L   +Q+    + + I+H+L +      R+ V+  G ++E GD   + 
Sbjct: 449 ALDVTVRAQVLDLFSDLQKRYGFSCLFISHDLGVVEQVADRVVVMQDGRIIEEGDRDTIF 508

Query: 245 RQPFHPYTLGLLLSEPPVD 263
             P   YT  LL + P +D
Sbjct: 509 DSPREAYTRRLLSAIPALD 527