Pairwise Alignments

Query, 265 a.a., ABC transporter permease from Sinorhizobium meliloti 1021

Subject, 271 a.a., ABC transporter, permease protein 2 (cluster 5, nickel/peptides/opines) from Variovorax sp. SCN45

 Score =  150 bits (379), Expect = 3e-41
 Identities = 88/255 (34%), Positives = 136/255 (53%)

Query: 8   LFAALIIAAVVICAVLGERIAPDSPFLQRLGVGDTPPSQDHIAGTDLLGRDVLSRVIYGA 67
           L   ++IA +++ AV+     P +P    L     PPS  H  GTD  GRDV SR + GA
Sbjct: 9   LIGGVLIAVLLVLAVVAAVWTPYNPLAIDLRSKLQPPSMAHWLGTDEFGRDVASRAMQGA 68

Query: 68  RTALAGPVVVAAGAFAISTLLGLLSGYLGGLVDSAIMRWVDFMFALPGPLVAIVVVGVVG 127
            T+    ++    A AI  ++G+++G++ G  D  +M + D + A PG L+A+ V+ +VG
Sbjct: 69  ATSCLVALLTVTLATAIGLVVGVVAGFVRGWTDRVLMAFNDTLLAFPGLLLALGVMVIVG 128

Query: 128 GGYWTAVLVLVVLFTAPDTRIVRSAVLEQRPLAYIDAARTLGISKTRILFVHILPNIAPI 187
              W  VL L + +     R+VR  VL  R   Y++A+R +G S+   ++ HILPN    
Sbjct: 129 ANKWGIVLALSMAYAPSVVRVVRGTVLSLREREYVEASRMIGNSELYTMWRHILPNCVAP 188

Query: 188 ILAYVVLDFAFALVNLAGLSFLGLGVEPGTPDWGRMLFENRTILFSNPAALLLPAGMIIL 247
           +       F + L++ + LSFLGLGV P  P WG ML   R  + S     ++P   I L
Sbjct: 189 VAVLATSMFGWVLLSESALSFLGLGVPPPAPTWGNMLASARPYMASAVWLCVVPGLCIAL 248

Query: 248 TAVSMNLVGDWLFER 262
           T + +NL+G+ L +R
Sbjct: 249 TLLGINLLGESLRDR 263