Pairwise Alignments

Query, 265 a.a., ABC transporter permease from Sinorhizobium meliloti 1021

Subject, 274 a.a., ABC transporter, permease protein 2 (cluster 5, nickel/peptides/opines) from Variovorax sp. SCN45

 Score =  172 bits (435), Expect = 9e-48
 Identities = 100/256 (39%), Positives = 153/256 (59%), Gaps = 9/256 (3%)

Query: 6   VVLFAALIIAAVVICAVLGERIAP----DSPFLQRLGVGDTPPSQDHIAGTDLLGRDVLS 61
           +V+ +AL++  + + A+     A     D+  L+RL      PS +H+ GTD LGRD+ S
Sbjct: 10  IVMVSALVLLVIAVMAIGAPLFASADPNDTAVLERLKA----PSAEHLLGTDELGRDMYS 65

Query: 62  RVIYGARTALAGPVVVAAGAFAISTLLGLLSGYLGGLVDSAIMRWVDFMFALPGPLVAIV 121
           R+++GAR +LA   + A GA    T+LGL++G+   L D+ +MR VD M + P  L+AI 
Sbjct: 66  RIVHGARYSLAIAALTALGAVVAGTVLGLMAGFFRRL-DAPLMRVVDAMMSFPDILLAIA 124

Query: 122 VVGVVGGGYWTAVLVLVVLFTAPDTRIVRSAVLEQRPLAYIDAARTLGISKTRILFVHIL 181
           +V ++G      VL LV+++T    R+VR++ L  R L +++A R LG+  +RIL+ HIL
Sbjct: 125 LVAILGPSLVNTVLALVLVYTPRVARVVRASTLVVRELLFVEAVRALGVRTSRILWRHIL 184

Query: 182 PNIAPIILAYVVLDFAFALVNLAGLSFLGLGVEPGTPDWGRMLFENRTILFSNPAALLLP 241
           PN+   IL  V   FA+A++  AGLSFLG+GV P  P WG M+  ++         +L P
Sbjct: 185 PNLMSPILVQVSFIFAYAILAEAGLSFLGVGVPPEIPTWGTMVAGSQQYAHQAFWVVLFP 244

Query: 242 AGMIILTAVSMNLVGD 257
              II TA+S+ L+GD
Sbjct: 245 GLAIIFTALSLQLLGD 260