Pairwise Alignments

Query, 265 a.a., ABC transporter permease from Sinorhizobium meliloti 1021

Subject, 303 a.a., ABC transporter, permease protein 2 (cluster 5, nickel/peptides/opines) from Variovorax sp. SCN45

 Score =  157 bits (397), Expect = 3e-43
 Identities = 102/273 (37%), Positives = 149/273 (54%), Gaps = 19/273 (6%)

Query: 6   VVLFAALIIAAVVICAVLGERIAPDSPF-LQRLGVGDT--PP------SQDHIAGTDLLG 56
           V + AALI    V+CAV    ++P +PF L  L +GD   PP      S  ++ GTD  G
Sbjct: 22  VAIAAALIALVCVVCAVFAGWVSPHNPFDLAALELGDARLPPAWSAEGSSKYLLGTDDQG 81

Query: 57  RDVLSRVIYGARTALAGPVVVAAGAFAISTLLGLLSGYLGGLVDSAIMRWVDFMFALPGP 116
           RD+LS VIYGAR +L   +V    +  +  +LGLL+G+ GG +DS +MR  D M + P  
Sbjct: 82  RDILSAVIYGARISLIVGLVSVVLSVVVGVVLGLLAGFFGGWLDSFLMRVCDVMLSFPPI 141

Query: 117 LVAIVVVGV-----VGGGYWTAVLVLVVLFTAPD----TRIVRSAVLEQRPLAYIDAART 167
           LVA+++ GV      G     A  VL+V  +        R VR + L +R   Y+ AAR 
Sbjct: 142 LVALLIAGVGRALFPGAHESLAFGVLIVSISLTGWVQYARTVRGSTLVERNKEYVQAARV 201

Query: 168 LGISKTRILFVHILPNIAPIILAYVVLDFAFALVNLAGLSFLGLGVEPGTPDWGRMLFEN 227
            G++  RI+  H+LPN+   +     +  A A++  A LSFLG+GV P +P  G ++   
Sbjct: 202 TGVAPMRIMLRHVLPNVLGPVTVLATIQVATAIITEATLSFLGVGVPPTSPSLGTLISIG 261

Query: 228 RTILFSNPAAL-LLPAGMIILTAVSMNLVGDWL 259
              LFS    + + P  M++L A+S+NL+GDWL
Sbjct: 262 NQYLFSGEWWITVFPGLMLVLIALSVNLLGDWL 294