Pairwise Alignments

Query, 265 a.a., ABC transporter permease from Sinorhizobium meliloti 1021

Subject, 298 a.a., ABC transporter, permease protein 2 (cluster 5, nickel/peptides/opines) from Variovorax sp. SCN45

 Score =  166 bits (419), Expect = 7e-46
 Identities = 95/253 (37%), Positives = 137/253 (54%)

Query: 7   VLFAALIIAAVVICAVLGERIAPDSPFLQRLGVGDTPPSQDHIAGTDLLGRDVLSRVIYG 66
           ++F  +I+AA+V+ A+    +AP  P  Q +     PP   H  GTD LGRD+LSRVIYG
Sbjct: 37  MVFGLVILAAMVLAALFAPWLAPFDPNAQNVQQRLLPPGAAHWLGTDQLGRDLLSRVIYG 96

Query: 67  ARTALAGPVVVAAGAFAISTLLGLLSGYLGGLVDSAIMRWVDFMFALPGPLVAIVVVGVV 126
            R  L    +VA  +  +  LLG+ +GY GG +D+ +MR  D   A P  ++A+ +V V+
Sbjct: 97  TRPTLLIVSLVALLSAPLGLLLGMCAGYFGGWIDTLLMRVTDIFMAFPRLVLALALVAVL 156

Query: 127 GGGYWTAVLVLVVLFTAPDTRIVRSAVLEQRPLAYIDAARTLGISKTRILFVHILPNIAP 186
           G G   AV+ + +       RI R+     R   +I AAR  G+   RILF H+LP   P
Sbjct: 157 GPGIVNAVIAIAITAWPAYARIARTETRTVRGSDFIQAARVQGLRPARILFGHLLPICLP 216

Query: 187 IILAYVVLDFAFALVNLAGLSFLGLGVEPGTPDWGRMLFENRTILFSNPAALLLPAGMII 246
             +  V LD A  ++  AGL FLGLG +P   +WG M+   R  +F       +P   I+
Sbjct: 217 STVVRVTLDMAGIILTAAGLGFLGLGAQPPMSEWGAMISTGRQYIFDQWWVAAVPGVAIL 276

Query: 247 LTAVSMNLVGDWL 259
           L +++ NLVGD L
Sbjct: 277 LGSLAFNLVGDGL 289