Pairwise Alignments

Query, 265 a.a., ABC transporter permease from Sinorhizobium meliloti 1021

Subject, 298 a.a., D,D-dipeptide ABC transporter permease from Escherichia coli BL21

 Score =  142 bits (359), Expect = 6e-39
 Identities = 82/247 (33%), Positives = 128/247 (51%)

Query: 11  ALIIAAVVICAVLGERIAPDSPFLQRLGVGDTPPSQDHIAGTDLLGRDVLSRVIYGARTA 70
           A+II  +++  +    +A   P    L     PPS  H  GTD +GRD+ SRV+ G++ +
Sbjct: 37  AVIIVLMLLMMIFSPWLATHDPNAIDLTARLLPPSAAHWFGTDEVGRDLFSRVLVGSQQS 96

Query: 71  LAGPVVVAAGAFAISTLLGLLSGYLGGLVDSAIMRWVDFMFALPGPLVAIVVVGVVGGGY 130
           +   +VV A A  I +LLG LSG LGG  D+ IMR +D M ++P  ++ + +   +G   
Sbjct: 97  ILAGLVVVAIAGMIGSLLGCLSGVLGGRADAIIMRIMDIMLSIPSLVLTMALAAALGPSL 156

Query: 131 WTAVLVLVVLFTAPDTRIVRSAVLEQRPLAYIDAARTLGISKTRILFVHILPNIAPIILA 190
           + A+L + ++      R+ R   L  R   Y+ AA+T G S+  ++  HIL N  P ++ 
Sbjct: 157 FNAMLAIAIVRIPFYVRLARGQALVVRQYTYVQAAKTFGASRWHLINWHILRNSLPPLIV 216

Query: 191 YVVLDFAFALVNLAGLSFLGLGVEPGTPDWGRMLFENRTILFSNPAALLLPAGMIILTAV 250
              LD   A++  A L F+GLG +  + +WG M+   R  +         P   I+LTAV
Sbjct: 217 QASLDIGSAILMAATLGFIGLGAQQPSAEWGAMVANGRNYVLDQWWYCAFPGAAILLTAV 276

Query: 251 SMNLVGD 257
             NL GD
Sbjct: 277 GFNLFGD 283