Pairwise Alignments

Query, 338 a.a., ABC transporter permease from Sinorhizobium meliloti 1021

Subject, 313 a.a., peptide ABC transporter from Pseudomonas simiae WCS417

 Score =  212 bits (540), Expect = 9e-60
 Identities = 116/311 (37%), Positives = 177/311 (56%), Gaps = 6/311 (1%)

Query: 26  FITRRFAVTIPLLLIISFGVFALIHIAPGDPVSSLLGARASDPATLAAIRARYHLDDSLL 85
           FI ++ A+ +P LL+IS  VFALI + PGDP   +LG  A DP +LA +R    LD SL+
Sbjct: 4   FILQKLAMAVPTLLLISVMVFALIRLIPGDPALLMLGDMA-DPQSLADMRHTLGLDHSLV 62

Query: 86  VQYGTWLSQVIRGDLGVSILGNRSVTSTIADRLGVTIFLSLMSTTLVLGLGILLGALAAF 145
            Q+  W   V+  DLG SI   ++V   I DR  V+  + L++      + + +G +AA+
Sbjct: 63  TQFLIWFKAVLSFDLGFSISTKQAVLPLILDRFSVSATIVLVAVLFATLIAVPIGLIAAW 122

Query: 146 RRGTGLDRTVVMFSVFGISSPAFVTGIFFLYVFGVLLHWFPTFGAGTGFLDRAW----HL 201
           ++ + LD  +V  +   +S P+F  G+  L+ FG+ L W P  G    F    W    ++
Sbjct: 123 KQNSALDLGLVSIATLLLSIPSFWLGLLLLHAFGIQLGWLPVVGY-VSFSQAPWQAMSYM 181

Query: 202 ALPALALAASTMAIVVKITRAAVIEELARDYVTFARARGVSSRRILLAYVLRNSLIPVIT 261
            LP + L    +  + ++ RA+ IE L  +Y+  ARA+G+S R +L  + L N+  P  T
Sbjct: 182 VLPVVTLTLVEVGAITRMARASTIEVLRLEYIAHARAKGLSERAVLWKHALPNAFAPTWT 241

Query: 262 AAGLIVIGILAGAIYVEVTFSLPGLGALMIDAVQKRDIPTIQGITLLFSAFVVLVNLAVD 321
             GLI+  +L G   +E  F+LPG+G LM+DA+  RD P +QG  LL +   VLVNL VD
Sbjct: 242 LVGLILGNLLGGIAVLETVFTLPGIGRLMVDAIFARDYPVLQGCLLLITFIYVLVNLCVD 301

Query: 322 VIYTLIDPRIR 332
           ++Y L DPR++
Sbjct: 302 LLYPLFDPRVK 312