Pairwise Alignments

Query, 338 a.a., ABC transporter permease from Sinorhizobium meliloti 1021

Subject, 317 a.a., ABC transporter, permease protein 1 (cluster 5, nickel/peptides/opines) from Variovorax sp. SCN45

 Score =  226 bits (576), Expect = 6e-64
 Identities = 120/314 (38%), Positives = 188/314 (59%), Gaps = 4/314 (1%)

Query: 22  SLVVFITRRFAVTIPLLLIISFGVFALIHIAPGDPVSSLLGARASDPATLAAIRARYHLD 81
           SL  +I  R A  + +L I++  VF L   A GDPVS LLG +A+  A +A ++  Y LD
Sbjct: 4   SLFRYIASRAAGMLVVLAIVAVLVFVLTRAASGDPVSVLLGDQAT-AADIARVQKEYGLD 62

Query: 82  DSLLVQYGTWLSQVIRGDLGVSILGNRSVTSTIADRLGVTIFLSLMSTTLVLGLGILLGA 141
             L VQ+G WL +V++G+LG SI   R VT  + +R   T  L+LM+  +   +G+  G 
Sbjct: 63  KPLPVQFGYWLREVLQGNLGTSIFLQRPVTQALWERSEPTTLLALMAVAIAALIGVPCGI 122

Query: 142 LAAFRRGTGLDRTVVMFSVFGISSPAFVTGIFFLYVFGVLLHWFPTFGAGTG---FLDRA 198
           ++A  RG  +D+     ++ G S P+F  GI  + +F V   WFP  G G     F +R 
Sbjct: 123 VSAVFRGRVVDQLFTGIAMLGASIPSFWLGIVLIQIFAVSFGWFPVSGYGAPDAPFAERL 182

Query: 199 WHLALPALALAASTMAIVVKITRAAVIEELARDYVTFARARGVSSRRILLAYVLRNSLIP 258
             L LPA  L     A++++ TRA++++ L  DYV  AR++G+S   ++L + LRN+L+P
Sbjct: 183 HSLVLPATVLGLLNSALIIRFTRASMLDVLGEDYVRTARSKGLSESVVVLKHALRNALVP 242

Query: 259 VITAAGLIVIGILAGAIYVEVTFSLPGLGALMIDAVQKRDIPTIQGITLLFSAFVVLVNL 318
           ++T  GL V  ++ GA+  E  F LPG+G L++ AV +RD P IQG  L+ +A  VL+N 
Sbjct: 243 IVTVIGLTVALMIGGAVITETVFGLPGVGNLVVSAVLRRDYPVIQGALLVIAAIYVLINF 302

Query: 319 AVDVIYTLIDPRIR 332
           ++D++Y ++DPR++
Sbjct: 303 SIDLLYAVVDPRVK 316