Pairwise Alignments

Query, 338 a.a., ABC transporter permease from Sinorhizobium meliloti 1021

Subject, 313 a.a., ABC transporter, permease protein 1 (cluster 5, nickel/peptides/opines) from Variovorax sp. SCN45

 Score =  227 bits (579), Expect = 3e-64
 Identities = 118/314 (37%), Positives = 182/314 (57%), Gaps = 4/314 (1%)

Query: 23  LVVFITRRFAVTIPLLLIISFGVFALIHIAPGDPVSSLLGARASDPATLAAIRARYHLDD 82
           ++ F+ +R   T+P+LL+++  +F ++ + PGDP ++++G  ++    L  IR +  L  
Sbjct: 1   MLTFLGKRLLATLPVLLVVAVAIFMIVRLTPGDP-AAVIGGNSATNEDLDRIRVQLGLTR 59

Query: 83  SLLVQYGTWLSQVIRGDLGVSILGNRSVTSTIADRLGVTIFLSLMSTTLVLGLGILLGAL 142
            L  Q+  W + V+ GDLG S   N+ VT  I  R+  T+ L+  +  L + + + LG L
Sbjct: 60  PLWEQFAIWCNGVLHGDLGFSFFLNKPVTELIGQRMEPTLSLAGGTLLLAVAIALPLGTL 119

Query: 143 AAFRRGTGLDRTVVMFSVFGISSPAFVTGIFFLYVFGVLLHWFPTFG---AGTGFLDRAW 199
           AA+R G  LD+ V+ FSV G S P FV G   +Y+  + L WFP  G      G      
Sbjct: 120 AAWRMGGWLDKAVMAFSVAGFSVPVFVVGYVLIYLLAMKLQWFPVQGYRRIADGVGPWLH 179

Query: 200 HLALPALALAASTMAIVVKITRAAVIEELARDYVTFARARGVSSRRILLAYVLRNSLIPV 259
            L LP L LA + +A++ ++TRAAV E L  D++  ARA+G++   +L  + LRN+ +PV
Sbjct: 180 QLVLPCLTLAITYVALLSRVTRAAVSEALTEDFIRTARAKGITELEVLKHHALRNAAVPV 239

Query: 260 ITAAGLIVIGILAGAIYVEVTFSLPGLGALMIDAVQKRDIPTIQGITLLFSAFVVLVNLA 319
           +T  G+    +L G +  E  F++PGLG L +DAV  RD P +QG+ L F+   V VNL 
Sbjct: 240 VTVIGVSAALLLGGVVVTETVFAIPGLGQLTVDAVLNRDFPVLQGVVLFFAVVYVAVNLL 299

Query: 320 VDVIYTLIDPRIRF 333
           VD+ Y  IDPRIR+
Sbjct: 300 VDLSYLFIDPRIRY 313