Pairwise Alignments

Query, 338 a.a., ABC transporter permease from Sinorhizobium meliloti 1021

Subject, 314 a.a., peptide transport system permease ABC transporter protein from Sinorhizobium meliloti 1021

 Score =  228 bits (581), Expect = 2e-64
 Identities = 121/314 (38%), Positives = 192/314 (61%), Gaps = 4/314 (1%)

Query: 23  LVVFITRRFAVTIPLLLIISFGVFALIHIAPGDPVSSLLGARASDPATLAAIRARYHLDD 82
           ++ ++  R    IP++ +++  VF L ++ PGD  S + G  AS PA +AA+R + HLDD
Sbjct: 1   MIRYLIARILSAIPVIGVVTIVVFGLTYLGPGDAASLMAGDYAS-PADIAALRVKLHLDD 59

Query: 83  SLLVQYGTWLSQVIRGDLGVSILGNRSVTSTIADRLGVTIFLSLMSTTLVLGLGILLGAL 142
            ++ QY  WL  V++GD G SI   + V + I  R+  TI L++ +T + + + + LG L
Sbjct: 60  PIITQYIYWLGNVLKGDFGHSIFSQQPVLALILSRVEPTITLAIAATLVAVVVAVPLGLL 119

Query: 143 AAFRRGTGLDRTVVMFSVFGISSPAFVTGIFFLYVFGVLLHWFPTFG-AG--TGFLDRAW 199
           AA  +G   D+ V +F V G + PAF+ G   ++ FGV     P  G AG  +G L+ A 
Sbjct: 120 AAHNKGGIADQVVSLFGVAGTAIPAFLIGYLLIFAFGVYYGSMPIAGFAGIESGLLEMAK 179

Query: 200 HLALPALALAASTMAIVVKITRAAVIEELARDYVTFARARGVSSRRILLAYVLRNSLIPV 259
           H+ LPA+ L  +  A++ +ITRA+ IE L +D+V  ARA+G+    I++ + L+   +PV
Sbjct: 180 HVLLPAIMLGFAQTALISRITRASAIEALNQDFVRVARAKGLDEITIMIWHCLKPIAVPV 239

Query: 260 ITAAGLIVIGILAGAIYVEVTFSLPGLGALMIDAVQKRDIPTIQGITLLFSAFVVLVNLA 319
           IT  G     +L G +  E  F++PG+G+L+++A+Q +DIP IQG+ LL S   VLVNL 
Sbjct: 240 ITIVGTSFAHMLGGVVITETVFAIPGIGSLLVEAIQHKDIPVIQGVLLLSSLVYVLVNLL 299

Query: 320 VDVIYTLIDPRIRF 333
           VD+ Y ++DPRI++
Sbjct: 300 VDLSYLIVDPRIKY 313