Pairwise Alignments

Query, 338 a.a., ABC transporter permease from Sinorhizobium meliloti 1021

Subject, 315 a.a., peptide ABC transporter permease from Sinorhizobium meliloti 1021

 Score =  207 bits (527), Expect = 3e-58
 Identities = 112/315 (35%), Positives = 180/315 (57%), Gaps = 12/315 (3%)

Query: 26  FITRRFAVTIPLLLIISFGVFALIHIAPGDPVSSLLGARASDPATLAAIRARYHLDDSLL 85
           ++ +R    +P+L  +S  VF ++ + PGD  +++LG+ A+ P  +  I     LD  L+
Sbjct: 4   YVLKRLVAVVPVLFGLSIIVFLVMGLIPGDTATAILGSYAT-PENVERINRDLGLDKPLV 62

Query: 86  VQYGTWLSQVIRGDLGVSILGNRSVTSTIADRLGVTIFLSLMSTTLVLGLGILLGALAAF 145
            QY  W+  V++GD G S   NR V   + +R   T+ L+ +S  L   +G+L G ++A 
Sbjct: 63  QQYAIWIGNVLQGDFGRSFALNRPVLDEVLERFQATLVLAGVSLVLCSVIGLLAGVVSAV 122

Query: 146 RRGTGLDRTVVMFSVFGISSPAFVTGIFFLYVFGVLLHW--------FPTFGAGTGFLDR 197
           R+    DR +  F + GIS+P+F  G+  +Y+F V  HW        +  +G G    D 
Sbjct: 123 RQFGWADRVITFFVLAGISTPSFWLGLLLIYLFAV--HWRILPASGMYAVYGRGD-LKDL 179

Query: 198 AWHLALPALALAASTMAIVVKITRAAVIEELARDYVTFARARGVSSRRILLAYVLRNSLI 257
             HL LPA  LA     ++ ++TR A++E L +DYV  ARA+G+  RR++ A+  R +L+
Sbjct: 180 LLHLILPAATLAVVAAGVIARLTRGAMLEVLRQDYVRTARAKGLPERRVIYAHAFRAALV 239

Query: 258 PVITAAGLIVIGILAGAIYVEVTFSLPGLGALMIDAVQKRDIPTIQGITLLFSAFVVLVN 317
            V+ A G+    +L GA+YVE  F  PG+GA+++ A+  RDI  +QG  L+ +A  VL N
Sbjct: 240 SVVPAIGIQAGFVLGGAVYVETVFQWPGIGAMLVKAISTRDILLVQGGVLVVAASYVLFN 299

Query: 318 LAVDVIYTLIDPRIR 332
           L  DV+ +++DPRIR
Sbjct: 300 LLADVVQSMLDPRIR 314