Pairwise Alignments

Query, 338 a.a., ABC transporter permease from Sinorhizobium meliloti 1021

Subject, 306 a.a., oligopeptide ABC transporter permease OppB from Dickeya dianthicola ME23

 Score =  194 bits (493), Expect = 2e-54
 Identities = 106/312 (33%), Positives = 177/312 (56%), Gaps = 7/312 (2%)

Query: 23  LVVFITRRFAVTIPLLLIISFGVFALIHIAPGDPVSSLLGARASDPATLAAIRARYHLDD 82
           ++ FI RR    IP L I+    F ++ +APG P +   G R   P  +A I A+YHL+D
Sbjct: 1   MLKFIFRRCLEAIPTLFILITISFFMMRLAPGSPFT---GERNLPPEVMANIEAKYHLND 57

Query: 83  SLLVQYGTWLSQVIRGDLGVSI-LGNRSVTSTIADRLGVTIFLSLMSTTLVLGLGILLGA 141
            ++ QYG +L Q+++GD G S    + SV   +     V+  L   +  L + LG+  G 
Sbjct: 58  PMIKQYGNYLVQLLKGDFGPSFKYKDYSVNDLVVRAFPVSAKLGAAAFLLAVVLGVTSGV 117

Query: 142 LAAFRRGTGLDRTVVMFSVFGISSPAFVTGIFFLYVFGVLLHWFPTFGAGTGFLDRAWHL 201
           +AA  + +  D TV+ F++ G+  P+FV     + +F + L W P  G   G      ++
Sbjct: 118 IAALNQNSKWDYTVMGFAMTGVVIPSFVVAPLLVLIFAITLRWLPGGGWNGG---APKYI 174

Query: 202 ALPALALAASTMAIVVKITRAAVIEELARDYVTFARARGVSSRRILLAYVLRNSLIPVIT 261
            LP +AL+ S +A + +ITR ++IE L  +++  ARA+G+  RRI+L + L+ +L+PV++
Sbjct: 175 ILPMVALSLSYIASIARITRGSMIEVLHSNFIRTARAKGLPLRRIILRHALKPALLPVLS 234

Query: 262 AAGLIVIGILAGAIYVEVTFSLPGLGALMIDAVQKRDIPTIQGITLLFSAFVVLVNLAVD 321
             G   +GI+ G++ +E  F LPG+G L ++    RD   +  +T+L  A  +L N  +D
Sbjct: 235 YMGPAFVGIITGSMVIETIFGLPGIGQLFVNGALNRDYSLVLSLTVLVGALTILFNAVID 294

Query: 322 VIYTLIDPRIRF 333
           V+Y +IDP+IR+
Sbjct: 295 VLYAVIDPKIRY 306