Pairwise Alignments

Query, 338 a.a., ABC transporter permease from Sinorhizobium meliloti 1021

Subject, 316 a.a., oligopeptide ABC transporter permease from Agrobacterium fabrum C58

 Score =  211 bits (537), Expect = 2e-59
 Identities = 122/315 (38%), Positives = 180/315 (57%), Gaps = 4/315 (1%)

Query: 23  LVVFITRRFAVTIPLLLIISFGVFALIHIAPGDPVSSLLGARASDPATLAAIRARYHLDD 82
           ++  + RR    I  L  +S  ++ ++ + PGDP + +LG  AS P TLAA++ +  LD 
Sbjct: 1   MLAVLIRRLVSLIITLFAVSLIIYVVMGLLPGDPAAIMLGTSAS-PDTLAALQKQMGLDQ 59

Query: 83  SLLVQYGTWLSQVIRGDLGVSILGNRSVTSTIADRLGVTIFLSLMSTTLVLGLGILLGAL 142
            L ++Y  WL+ V RGDLG S      V   I +RL VT+ L+L++  L + + I LG  
Sbjct: 60  PLPLRYLHWLAGVFRGDLGQSYTYGVPVAGLIIERLAVTLPLALLAIFLSVTIAIPLGVA 119

Query: 143 AAFRRGTGLDRTVVMFSVFGISSPAFVTGIFFLYVFGVLLHWFPTFGA---GTGFLDRAW 199
           AA  R   LD    +FS  GI+ P F  G+  + VF   L W P+ G       F     
Sbjct: 120 AAQNRNGALDFAAGLFSHVGIAVPGFWVGLLLIIVFSTTLGWMPSGGFPGWSPSFSAGLV 179

Query: 200 HLALPALALAASTMAIVVKITRAAVIEELARDYVTFARARGVSSRRILLAYVLRNSLIPV 259
            L LPA+ALA S   ++ ++ R+AV+E +  D+V  ARA+G+S R  L  + + N++IPV
Sbjct: 180 ALVLPAIALALSQAGVLTRVCRSAVLEVMNEDFVRTARAKGLSERVALWRHAVPNAMIPV 239

Query: 260 ITAAGLIVIGILAGAIYVEVTFSLPGLGALMIDAVQKRDIPTIQGITLLFSAFVVLVNLA 319
           +T  GL    ++AGA+ VE  F+LPGLG L   A+ +RDI  +Q + L FSA V+++N  
Sbjct: 240 VTMIGLQFTFLIAGAVLVENVFNLPGLGRLAYQALTQRDIVVMQSVVLFFSALVIIMNFV 299

Query: 320 VDVIYTLIDPRIRFG 334
           VD+ Y  IDPR+R G
Sbjct: 300 VDIAYLFIDPRLRAG 314