Pairwise Alignments

Query, 534 a.a., ABC transporter substrate-binding protein from Sinorhizobium meliloti 1021

Subject, 543 a.a., Dipeptide ABC transporter, substrate-binding protein DppA (TC 3.A.1.5.2) from Variovorax sp. SCN45

 Score =  115 bits (288), Expect = 4e-30
 Identities = 118/452 (26%), Positives = 194/452 (42%), Gaps = 47/452 (10%)

Query: 87  LADRWE-EVDPTTIKYHLRGGVKFGDGSP-------LAADDIVATFKYHMSPDSP----- 133
           LA++W+   D T   +HLR GVK+   S          ADD +   +       P     
Sbjct: 83  LAEKWDISADGTVYTFHLRKGVKWHTTSKSFKPTRDFNADDFIFMLERQWKESDPFFKVT 142

Query: 134 SQLASFYNSVA------TVEATAPDEVTVKLKAPNVQFAFTPA-HMAGFVFKKEQLADKN 186
           SQ  S++N +       TV+      V + L  P   F    A   AG   K+  +A   
Sbjct: 143 SQNHSYFNDMGMPKLLKTVDRIDDYTVKIVLNQPEAPFLANLAMQYAGIQSKEYAIAMLK 202

Query: 187 IGTPEAL---PLGTGAYKLVEFVPTDRVILEARDDYSGPKPAVKRITFKAIPDRPARLLA 243
            GTPE +   P+GTG + LV++     +  +A   Y G K  +  + F   PD   R   
Sbjct: 203 AGTPEKVDQDPIGTGPFYLVQYQKDAVIRFKAFPQYWGGKAKIDDLVFAITPDASVRWAK 262

Query: 244 MQQGEIDGTFDLAISDIDQWKALGNVDVVAAPSLGVYLLTLDHSAPPFDDIHVRRAVAYS 303
           +Q+GE         +D+D  +   NV V+  P L V  L+ + +  PFDD+ VR+A+  +
Sbjct: 263 LQKGECHVMPYPNPADLDAIRKDPNVQVLEQPGLNVGYLSYNTTKKPFDDVRVRKAINMA 322

Query: 304 VDRNGLVQALLKGNGEAATALNPPEIWSGVLPPDEVRAFYATLLPNYAFDLNKAKAELAQ 363
           +++  ++  +    G AA    PP +WS           Y   + +  +D   AK  LAQ
Sbjct: 323 INKKAIIDGVYLTTGVAAKNPIPPTMWS-----------YNDAVKDDPYDPEAAKKLLAQ 371

Query: 364 SNHPDGFDVTIPASTAD-PYMVN---ILQSVTENLKQIGIRAHIQESDNNTW--FTNYVT 417
           + +PDGF   + A     PY  N   I + +  +L +I ++A I+  +   W  +   + 
Sbjct: 372 AGYPDGFSTDLWAMPVQRPYNPNAKRIAELMQADLAKINVKAEIKSFE---WGEYRKRLQ 428

Query: 418 HDKLGMQIMAYYPDFADAANYPSLFFSSANAEK-GGMNGSNFNNREVDAKLKIANENADP 476
             +  M ++ +  D  D  N+       A+A+   G N S F  +  +  L +  ++   
Sbjct: 429 AGEHQMGMLGWTGDNGDPDNFLYTLLGCASAKSASGSNISKFCYQPYE-DLVVKAKSTVK 487

Query: 477 KARADALKKVFTIANEEVAVVPIFWPASAMAI 508
           +A  DAL K   +  +E A  P F  A A+ +
Sbjct: 488 QADRDALYKKAQVIFKEQA--PWFTIAHAVQL 517