Pairwise Alignments

Query, 534 a.a., ABC transporter substrate-binding protein from Sinorhizobium meliloti 1021

Subject, 520 a.a., peptide-binding periplasmic ABC transporter protein from Sinorhizobium meliloti 1021

 Score =  117 bits (293), Expect = 1e-30
 Identities = 117/472 (24%), Positives = 207/472 (43%), Gaps = 36/472 (7%)

Query: 61  TYTGAIMSLVQEGLLGFGEDLGLETALADRWEEVDPTTIKYHLRGGVKFGDGSPLAADDI 120
           +YT + ++ V EGL+ +  +L +E ALA+ WE V  T  ++HLR GVKF DG+   ADD+
Sbjct: 43  SYTLSFLNHVYEGLVRYDANLKIEPALAESWETVSDTVWRFHLRKGVKFHDGAEFTADDV 102

Query: 121 VATFKYHMSPDSP--SQLASFYNSVATVEATAPDEVTVKLKAPNVQFAFTPAHM--AGFV 176
           +A+ K    P SP    L ++ +S    + T   ++ +    P +    T  H+  AG++
Sbjct: 103 LASLKRVSDPVSPLRGNLPAYKSSKKVDDHTI--DIELSGPYPLLLNDLTNIHVFDAGWL 160

Query: 177 -----FKKEQLADKNIGTPEALPLGTGAYKLVEFVPTDRVILEARDDY--SGPKPAVKRI 229
                 K   +  K  G       GTG +KL   VP  + +L    D+     K  V RI
Sbjct: 161 KTNNSEKPTDVGAKIEGYATYHTNGTGPFKLESRVPDSKTVLVKNPDWWDKTSKSNVDRI 220

Query: 230 TFKAIPDRPARLLAMQQGEIDGTFDLAISDIDQWKALGNVDVVAAPSLGVYLLTLDH--- 286
            F  I     R+ A+  GE++ T +    D+ + +A  ++ V+    L   ++  +    
Sbjct: 221 EFTPITSAATRVAALLSGEVNFTENAPSQDLPRLQAQPDLKVMERTDLRTVMVGFNRKPE 280

Query: 287 ----SAPPFDDIHVRRAVAYSVDRNGLVQALLKGNGEAATALNPPEIWSGVLPPDEVRAF 342
               S   F+D+ VR+A A+++DR+ + Q +++G    A A+  PEI  G  P       
Sbjct: 281 LANGSENKFNDLRVRQAFAHALDRDLIQQRVMRGKSRTAGAVVAPEI-PGYAP------- 332

Query: 343 YATLLPNYAFDLNKAKAELAQSNHPDGFDVTIPASTADPYM--VNILQSVTENLKQIGIR 400
              L    AFD   +K  LA++   D +  T+   T D Y+    + Q +   L + G +
Sbjct: 333 --ELDTTLAFDPALSKKLLAEAGASD-YPFTL-VCTTDAYVNEEELCQGLVNLLSRAGFK 388

Query: 401 AHIQESDNNTWFTNYVTHDKLGMQIMAYYPD-FADAANYPSLFFSSANAEKGGMNGSNFN 459
             +  +          T  K  + ++ +  +   D+ +       +  A  G  N   ++
Sbjct: 389 PQLDIAPTAAQAPKR-TSGKSDVYLIGWATEPMLDSYSILLQMIQTKTANAGVFNWGGWS 447

Query: 460 NREVDAKLKIANENADPKARADALKKVFTIANEEVAVVPIFWPASAMAINNK 511
             E+D  +  A+   D   R     K   +  +E+ ++P+     A  ++NK
Sbjct: 448 YPEIDKLIVQASTEMDRTKRLALQSKALQMVKDEIVMLPLHQQPMAWVMSNK 499