Pairwise Alignments

Query, 534 a.a., ABC transporter substrate-binding protein from Sinorhizobium meliloti 1021

Subject, 531 a.a., oligopeptidemurein peptide ABC transporter substrate-binding protein precursor from Sinorhizobium meliloti 1021

 Score =  122 bits (306), Expect = 3e-32
 Identities = 122/462 (26%), Positives = 197/462 (42%), Gaps = 47/462 (10%)

Query: 65  AIMSLVQEGLLGFGEDLGLETALADRWEEVDPTTIKYHLRGGVKFGDGSPLAADDIVATF 124
           +++S + E L+   ++L L+  LA  W  +  T   + LR  V+F DGS   ADD+V T 
Sbjct: 58  SLLSHIYERLVYQDDNLELKPGLATSWRPLSDTQWAFKLRDKVRFHDGSAFDADDVVYTI 117

Query: 125 KY---HMSPDSPSQLASFYNSVATVEATAPDEVTVKLKA----PNVQFAFTPAHMAGFVF 177
           +     + P S     S+ + + +V  +APD +TV ++     PN+   F+   +     
Sbjct: 118 ERIRDFLKPPSGG-FRSYVSGIKSV--SAPDPLTVLIETDGAVPNLPLFFSSLFVMNRPS 174

Query: 178 KK-EQLADKNIGTPEALPLGTGAYKLVEFVPTDRVILEARDDYSGPKPAVKRITFKAIPD 236
           K  E   + N G P   P GTG Y+   +   + + L   DDY G KPA  ++TF+ I +
Sbjct: 175 KGFETTENLNAGHP---PNGTGPYRFESWSSGESLRLARNDDYWGGKPAWSKVTFRVIEN 231

Query: 237 RPARLLAMQQGEIDGTFDLAISDIDQWKALG--------------NVDVVAAPSLGVYLL 282
             AR+ A+  GE+D    +   D+   K  G                DV      GV   
Sbjct: 232 PAARVAALSTGEVDVAHAIPARDVASLKQRGAKIASVGAARVNFVQFDVARDTLPGVTDK 291

Query: 283 TLDHSAPPFDDIHVRRAVAYSVDRNGLVQALLKGNGEAATALNP---PEIWSGVLPPDEV 339
           + +  A PF +  VRRA+  + DR  LV  +L G G AA  + P   P   + +LP    
Sbjct: 292 SGEPIANPFKNPLVRRALTLATDRGILVDKILAGYGTAAAQVFPNGLPGTSANLLPE--- 348

Query: 340 RAFYATLLPNYAFDLNKAKAELAQSNHPDGFDVTIPASTAD-PYMVNILQSVTENLKQIG 398
                   PNY    ++AK  LA++  PDGF++ +       P     LQ+V ++  +IG
Sbjct: 349 -------APNY----DEAKMLLAKAGFPDGFNLVLAGPAGRYPGDAESLQAVAQSWARIG 397

Query: 399 IRAHIQESDNNTWFTNYVTHDKLGMQIMAYYPDFADAANYPSLFFSSANAEKGGMNGSNF 458
           + A    +  + + T     D  G+       +  D   +  L         G +N   +
Sbjct: 398 VNAQPAAAPFSVFNTKRAAGD-YGVWYGGTSGEAVDIILHSLLASPDPERGTGALNFGKY 456

Query: 459 NNREVDAKLKIANENADPKARADALKKVFTIANEEVAVVPIF 500
            N   DA L  A   A    R  AL +   +   +  ++P++
Sbjct: 457 RNEAFDAMLAGAESIAVGPERNAALAQATELVMADQPIIPLY 498