Pairwise Alignments

Query, 534 a.a., ABC transporter substrate-binding protein from Sinorhizobium meliloti 1021

Subject, 526 a.a., putative Opine ABC transporter, periplasmic binding protein from Pseudomonas putida KT2440

 Score =  124 bits (312), Expect = 7e-33
 Identities = 145/523 (27%), Positives = 227/523 (43%), Gaps = 49/523 (9%)

Query: 16  AHAAFVSVTGTFVIARAAKAAEQIELVTWALPSIPD-TLFIPH-AWTTYTGAIMSLVQEG 73
           A AA V+++G   +A A  +A     V+   P I D T   PH A       I++ +   
Sbjct: 12  ALAALVTLSGISPLALAQDSARATISVS---PGIADITSLDPHRASLVGDKGIVAEMFNA 68

Query: 74  LLGF----GEDLGLETALADRWEEVDPTTI-KYHLRGGVKFGDG-SPLAADDIVATFKYH 127
           L+ F     +   LE  LA+RWE  D   +  + LR GV F  G   L A D+V + +  
Sbjct: 69  LVRFPPGSSDPAALEADLAERWESSDDKKVWTFFLRKGVMFHGGYGELKAADVVYSLQRA 128

Query: 128 MSPDSPSQLASFYNSVATVEATAPDEVTVKLKAPNVQFAFTPAHMAGFVFKKEQLADKNI 187
             P   S  A+F  ++  VEA     V V LK P+  F    ++  G     +  A+K  
Sbjct: 129 ADPKRSSFSANF-TALEKVEALDDYTVKVTLKYPDTAFLGRVSNYHGGQIVSKAAAEKLG 187

Query: 188 GTPEALPLGTGAYKLVEFVPTDRVILEARDDYSGPKPAVKRITFKAIPDRPARLLAMQQG 247
                 P+GTG +   E +    V L A D Y   KP +  I ++ IP   AR LA    
Sbjct: 188 ERYGQAPIGTGPFAFSEHITQQYVKLVANDQYFRGKPKLGAIVYRMIPSDSARELAFASD 247

Query: 248 EIDGTFDLAISD-IDQWKALG-NVDVVAAPSLGVYLLTLDHSAPPFDDIHVRRAVAYSVD 305
           E+D          +++ +A G NVDV          L L+ +  P DD+ VR+A+A SV+
Sbjct: 248 ELDLMLGKREQRWVERSRARGVNVDVFEPAEFRT--LFLNRNIKPLDDVKVRQAIAASVN 305

Query: 306 RNGLVQALLKGNGEAATALNPPEIWSGVLPPDEVRAFYATLLPNYAFDLNKAKAELAQSN 365
            N +++   K   +   +          + P+  +    +  P YA+D   AKA LA + 
Sbjct: 306 INEIIRYAGKDVADGGCS----------IIPNGYQGLDCSAGP-YAYDPAHAKALLASAG 354

Query: 366 HPDGFDVTIPASTADPYMVNILQSVTENLKQIGIRAHIQESDNNTWFTNYVTHDKLGMQI 425
           +P+G  +    S A P  + I++ +   L + GI   ++  D+ T    Y    +     
Sbjct: 355 YPNGLKLKSVVSNAAP-QLPIMEIIQAQLAKAGITLEMEVVDHAT----YQAKSRQDQSA 409

Query: 426 MAYYPDFADAANYPSL------FFSSANAEKGGMNGSNFNNREV-DAKLKIANENADPKA 478
           + +Y     AA YP        F+ SA+A       SNF +  V D  ++ A   ADP+ 
Sbjct: 410 IVFY----GAARYPGADYWLTEFYDSASAIGAPAAMSNFGHCSVADDAIRKARVEADPQT 465

Query: 479 RADALKKVFTIANEEVAVVPIF-----WPASAMAINNKYKLTG 516
           + D  KK     +++V  +P+F     W A A +++  Y L G
Sbjct: 466 QLDLWKKAQVQIHDDVCAIPLFGLKQVW-AKAASVDYGYVLHG 507