Pairwise Alignments

Query, 534 a.a., ABC transporter substrate-binding protein from Sinorhizobium meliloti 1021

Subject, 505 a.a., ABC transporter substrate binding protein (dipeptide) from Agrobacterium fabrum C58

 Score =  125 bits (313), Expect = 5e-33
 Identities = 132/460 (28%), Positives = 211/460 (45%), Gaps = 54/460 (11%)

Query: 29  IARAAKAAEQIELVTWALPSIPDTLFIPHAWTTYTG-AIMSLVQEGL--LGFGEDLGLET 85
           IA A  A+  I++V   LP   D L    A  +  G  IM  V E L  L      G+  
Sbjct: 21  IAPANAASTDIKIV---LPEEADLLEPCMATRSNIGRVIMENVSETLTELDVRGKQGVMP 77

Query: 86  ALADRWEEVDPTTIKYHLRGGVKFGDGSPLAADDIVATFKYHMSPDSPSQLASFYNSVAT 145
            LA++WE+   +  ++HLR GVKF DG    A D+  +F    S  +  +   ++  +  
Sbjct: 78  RLAEKWEQTGDSAWRFHLRQGVKFSDGKTFGAKDVKYSFDRIFSDKNICESRRYFGGMK- 136

Query: 146 VEATAPDEVTVKLKAPNVQFAFTPAHMAGFVFKKEQLADKNIGTPEAL---PLGTGAYKL 202
            +    D+ T+  K   VQ    P  ++      +       GTP A    P+GTG YKL
Sbjct: 137 FDVKVVDDNTIDFKVDPVQ-PILPLLLSLVTIVPD-------GTPLAFVREPIGTGPYKL 188

Query: 203 VEFVPTDRVILEARDDYSGPKPAVKRITFKAIPDRPARLLAMQQGEIDGTFDLAISDIDQ 262
             + P  +++L+ARDDY G KPAV + T+    D   R   +Q GE D     +IS +D 
Sbjct: 189 SNWTPGQQIVLDARDDYWGKKPAVTKATYLFRADPAVRAAMVQAGEAD--LAPSISQVDA 246

Query: 263 WKALGNVDVVAAPSLGVYLLTLDHSAPPFDDIHVRRAVAYSVDRNGLVQALLKGNGEAAT 322
                  D     S  VY L LD +  P +D+ VR+A+  ++DR   +  L+  +   AT
Sbjct: 247 TN--DKTDFSYLDSETVY-LRLDGNIAPLNDVRVRKALNLAIDRQAFIGTLVPQDAVLAT 303

Query: 323 ALNPPEI--WSGVLPPDEVRAFYATLLPNYAFDLNKAKAELAQSNH---PDGFDVTIPAS 377
           AL PP    W+    PD V+ F         +D ++AK  L ++     P    +TI A 
Sbjct: 304 ALVPPTTLGWN----PD-VKVF--------PYDPDQAKKLLEEAKAGGVPVDNPITIIAR 350

Query: 378 TAD-PYMVNILQSVTENLKQIGIRAH---IQESDNNTWFTNYVTHDKLGMQIMAYYPDFA 433
           TA+ P +  I+++V   L+ +G +     ++ +++  +++      + G QI+A   D +
Sbjct: 351 TANFPNVTEIMEAVQAQLQDVGFKVELRFVEVAEHEVYYSKPFKEGR-GPQIVAAMHDNS 409

Query: 434 DAANYPSLFFSSANAEKGGMNG--SNFNNREVDAKLKIAN 471
                 ++FF      K   NG  S F+++ VD  +K A+
Sbjct: 410 KGDPSFTMFF------KYDTNGTQSGFSDKNVDDLIKRAS 443