Pairwise Alignments

Query, 268 a.a., hypothetical protein from Sinorhizobium meliloti 1021

Subject, 294 a.a., Ku domain protein from Sphingobium sp. HT1-2

 Score =  172 bits (435), Expect = 1e-47
 Identities = 96/269 (35%), Positives = 151/269 (56%), Gaps = 4/269 (1%)

Query: 1   MALRPYWKGYLKLSLVTCPVQMMPATSESEKVRFHTLNRQTQNRVVSHYVDSVTGKEVKE 60
           MA R YW+G LKL+LV+ PV++ PAT     V F  ++  T   +   Y   V G    +
Sbjct: 1   MAARAYWQGQLKLALVSIPVEVYPATKSGAAVSFRQIHEPTGKPI--RYEKVVNGVGPVD 58

Query: 61  EDEV-KGYQRGEHEYVILEDEELENVALESTKTIDISTFTPRDSIEWIWLDTPYCLSPND 119
            DE+ KG++  +  YV+LE EE+E V +ES KT+D+  F   D+I+ ++ + PY + P D
Sbjct: 59  RDEILKGFELSKGNYVLLEQEEIEAVKIESRKTLDLVQFVEADAIDVLYYEKPYFVIPAD 118

Query: 120 PVGQEAFSVIRDAMEAQNMVGISRLVISRRERAVMLEPRGKGIVLWTLRYGDEVRDEDSY 179
            + +EA++V+RDA+     VG+ +L +  RE+ V ++P G+G+V+  LRY DEV    +Y
Sbjct: 119 DLAEEAYAVLRDALRKAKKVGLGQLSVRGREQLVSIKPCGRGLVMEVLRYADEVTKAQTY 178

Query: 180 FEAIGDEQADSEMMPLVQQLIKKQTKDWTPKMVADPVQERLLEIIAAKKKAL-KPQKAQG 238
           F  +  + AD +M+ L   +I K+T  + P+   D   + L  +I  KKKA  K    + 
Sbjct: 179 FRGLPADTADDDMLDLATSIIDKRTAPFRPEEFHDRYVDALHRLIEKKKKAKGKRIIEEV 238

Query: 239 KTAPSSSPSNVVSIMDALRKSVAAEKRAT 267
              P+    NV+ +M AL+KS     R T
Sbjct: 239 DEEPARKGGNVIDLMAALKKSAGETARTT 267