Pairwise Alignments

Query, 346 a.a., ATP-dependent DNA ligase from Sinorhizobium meliloti 1021

Subject, 543 a.a., DNA ligase from Xanthobacter sp. DMC5

 Score = 45.1 bits (105), Expect = 4e-09
 Identities = 79/307 (25%), Positives = 117/307 (38%), Gaps = 51/307 (16%)

Query: 59  EVKWDGYRL--AIHIEPKGVRII---TRGGHDWTHRFPAIAEATSKLGVGTAILDGEAVV 113
           E KWDG R+       P GVR++   +R G D +  FP +AEA +  G     +DGE ++
Sbjct: 225 EWKWDGIRVQAVAGTGPDGVRVVRLYSRTGEDISDAFPDMAEAITFDGA----MDGELLI 280

Query: 114 LDEEGRSDFGALQRSLGGRG---GKRSSTESVFFAFDLLYFDGHDLSGTELSVRRHLLEG 170
           + +     F  LQ+ L  +       +   +   A+DLL     DL     + RR  LE 
Sbjct: 281 VRDGRVEPFNVLQQRLNRKTVTVKMLAEFPAHIRAYDLLVDGTDDLREQPFAARRARLEA 340

Query: 171 FLD---------GPTGAIQSSEEVFG---DGALLEKACSMG-LKGIIAKHRDWPYRSGR- 216
            +           P     + E++     D A        G ++G++ K  D PY  GR 
Sbjct: 341 LVARLQTPRIDLSPMVPFSTWEDLTAARRDPASAGAGADAGAVEGVMIKRADSPYLPGRP 400

Query: 217 TGDWLKIKCLQSESFMIVGYEQSLTARGGLGS--------LLLAGRKGHD-WIYVGSVGT 267
            G W K K        ++ Y Q     G   S        +     +G D  + VG    
Sbjct: 401 KGPWWKWKRDPHTVDAVLMYAQ--RGHGKRSSFYSDYTFGVWTQSEEGEDVLVPVGKAYF 458

Query: 268 GFNTK-----DAEYLRKTLDRLKTSKPAVPLKGKNLVFAQPTLIAEIEFRGWTHDGSLRH 322
           GF  +     DA   R T++R    +  V  K + LV        E+ F G     S RH
Sbjct: 459 GFTDEELKQIDAFVRRATINRFGPVREVVHEKDEGLVL-------EVAFEGLAR--STRH 509

Query: 323 ASYKGLR 329
            S   +R
Sbjct: 510 RSGIAMR 516