Pairwise Alignments

Query, 346 a.a., ATP-dependent DNA ligase from Sinorhizobium meliloti 1021

Subject, 819 a.a., ATP-dependent DNA ligase from Pseudomonas simiae WCS417

 Score =  187 bits (474), Expect = 1e-51
 Identities = 124/347 (35%), Positives = 179/347 (51%), Gaps = 23/347 (6%)

Query: 8   LLQDDSVAKSKP-ARPRDPAQPNLPFDPMAERIEPCLALLKPVPPKGPDWVFEVKWDGYR 66
           +L D SV K K  A+ R  A P        E+  P LA L    P+G DW +E+K+DGYR
Sbjct: 182 VLSDASVGKPKTRAKARKTALP--------EQFTPQLATLVDRAPEG-DWQYEIKFDGYR 232

Query: 67  LAIHIEPKGVRIITRGGHDWTHRFPAIAEATSKLGVGTAILDGEAVVLDEEGRSDFGALQ 126
           +   I+   VR+ TR GHDWT   P   +A   L +  + LDGE V L+ +G  DF ALQ
Sbjct: 233 MLARIQAGEVRLFTRNGHDWTECLPRQVKALQALKLKDSWLDGEVVSLNGDGLPDFQALQ 292

Query: 127 RSLG-GRGGKRSSTESVFFAFDLLYFDGHDLSGTELSVRRHLLEGFLDGPTGAIQSSEEV 185
            +   GR     S + V++ FD  + +G D     +  RR  L+  L G    +    E 
Sbjct: 293 NAFDIGR-----SLDIVYYLFDAPFLNGEDRRQAPVEERRAALKEALAGSRSTLLRYSEA 347

Query: 186 FG--DGALLEKACSMGLKGIIAKHRDWPYRSGRTGDWLKIKCLQSESFMIVGYEQSLTAR 243
           F      + E AC + L+G+I K    PY S R+ DW+K+KC  S+ F+IVGY +   +R
Sbjct: 348 FTAHHRDIFESACDLALEGVIGKRLGSPYVSRRSADWIKLKCRLSQEFVIVGYTRPQGSR 407

Query: 244 GGLGSLLLAGRKGHDWIYVGSVGTGFN--TKDAEYLRKTLDRLKTSKPAVPL---KGKNL 298
            G G+LLLA       +Y G VGTGF+     A Y + T    +TS  A PL   + + +
Sbjct: 408 SGFGALLLAVNNDTGLVYAGRVGTGFDQAALKAIYAQLTPLECETSPLAKPLSSAQARGV 467

Query: 299 VFAQPTLIAEIEFRGWTHDGSLRHASYKGLREVQDNAAVFDMSERAI 345
            + +PTL+A+++F  WT +  +R A++ GLR  +  A V     R +
Sbjct: 468 HWVKPTLVAQVQFAEWTREDVVRQAAFVGLRTDKPVAQVVHEQPRTV 514