Pairwise Alignments

Query, 346 a.a., ATP-dependent DNA ligase from Sinorhizobium meliloti 1021

Subject, 551 a.a., ATP-dependent DNA ligase (EC 6.5.1.1) LigC from Variovorax sp. SCN45

 Score = 69.7 bits (169), Expect = 2e-16
 Identities = 90/301 (29%), Positives = 130/301 (43%), Gaps = 43/301 (14%)

Query: 50  PPKGPDWVFEVKWDGYRLAIHIEPKGVR-IITRGGHDWTHRFPAIAEATSKLGVGTAILD 108
           PP   DW+ E KWDG R  + ++  GV  + +RG    T RFP +A     L  GT +LD
Sbjct: 235 PPS--DWIVEWKWDGIRAQL-VKRAGVAWVWSRGEELVTERFPELAALGEALPDGT-VLD 290

Query: 109 GEAVVLDEEGRSDFGALQRSLGGR--GGK-RSSTESVFFAFDLLYFDGHDLSGTELSVRR 165
           GE  V  +     F  LQ+ +G +  G K       V  A+DLL ++G DL     S RR
Sbjct: 291 GEIAVWRDGKVQPFAELQKRIGRKTLGAKLLRDIPVVLLAYDLLEWEGQDLRALPQSRRR 350

Query: 166 HLLEGFLDG-------PTGAIQSSEEVFGDGAL-LEKACSMGLKGIIAKHRDWPYRSGRT 217
            LL+  +         P+  ++ ++  + D A   E A +MG++G++ K RD  Y  GRT
Sbjct: 351 VLLDELVARMRHPSLLPSPMLEGAD--WTDLATQREAARTMGVEGMMLKRRDAQYGVGRT 408

Query: 218 GD---WLKIKCLQSESFMIVGYEQSLTARGGLGSLLL----------AGRKGHDWIYVGS 264
            D   W K K        ++ Y Q     G   SL             G++    +    
Sbjct: 409 KDVGVWWKWKIDPLSIDAVLIYAQ--RGHGRRASLFSDYTFAVWDSPPGQEDRKLVPFAK 466

Query: 265 VGTGFNTKDAEYLR-KTLDRLKTSKPAVPLKGKNLVFAQPTLIAEIEFRGWTHDGSLRHA 323
             +G    DAE  R   + R  T +   P+K       +PTL+ E+ F G     S RH 
Sbjct: 467 AYSGLT--DAEMARVDAIIRKTTVESFGPVKS-----VKPTLVFELGFEGIAR--STRHK 517

Query: 324 S 324
           S
Sbjct: 518 S 518