Pairwise Alignments

Query, 346 a.a., ATP-dependent DNA ligase from Sinorhizobium meliloti 1021

Subject, 532 a.a., ATP-dependent DNA ligase (EC 6.5.1.1) LigC from Sphingobium sp. HT1-2

 Score = 63.2 bits (152), Expect = 2e-14
 Identities = 83/302 (27%), Positives = 128/302 (42%), Gaps = 45/302 (14%)

Query: 55  DWVFEVKWDGYRLAIHIEPKGVRIITRGGHDWTHRFPAIAEATSKLGVGTAILDGEAVVL 114
           D+  E KWDG R+ I    +  R+ +R G D T  FP IA+A +    G A+LDGE +V 
Sbjct: 222 DYAAEWKWDGIRIQIVGTGRETRLYSRAGDDITGSFPEIAQAFT----GHAVLDGELLVK 277

Query: 115 DE--------EGRSDFGALQRSLGGR--GGKRSSTESVFF-AFDLLYFDGHDLSGTELSV 163
            E           + F ALQ+ LG +    K  +    F   +DLL     DL     + 
Sbjct: 278 GEFQGAKEHGGAAASFNALQQRLGRKAVSAKMMADYPAFVRLYDLLIEGDDDLRALPWTQ 337

Query: 164 RRHLLEGFLDGPTGAIQSSEEVFGDGALLEK------------ACSMGLKGIIAKHRDWP 211
           RR  LE ++       Q S + F   A+++             A    ++G++ K RD P
Sbjct: 338 RRARLEAYM------AQLSPDRFDLSAVIDAPDFAALADIRAGARDAAIEGVMLKRRDSP 391

Query: 212 YRSGRTGD-WLKIKCLQSESFMIVGYEQ-SLTARGGLGSLLLAG--RKGHDWIYVGSVGT 267
           Y +GR    W K K     +  ++ Y Q     R    S    G   +  + + VG   +
Sbjct: 392 YVAGRKAALWYKWKRDPLTADCVMMYAQRGHGKRSSFYSDYTFGCWTEDGELLPVGKAYS 451

Query: 268 GFNTKDAEYLRKTLDRLKTSKPAVPLKGKNLVFAQPTLIAEIEFRGWTHDGSLRHASYKG 327
           GF  ++ ++L + + R  T     P++       + TL+ E+ F    HD S RH S   
Sbjct: 452 GFTDEELKWLDRFV-RGNTVNRFGPVRE-----VEKTLVLEVAFDS-IHD-SKRHKSGLA 503

Query: 328 LR 329
           +R
Sbjct: 504 MR 505