Pairwise Alignments

Query, 346 a.a., ATP-dependent DNA ligase from Sinorhizobium meliloti 1021

Subject, 537 a.a., ATP-dependent DNA ligase from Sinorhizobium meliloti 1021

 Score = 55.5 bits (132), Expect = 3e-12
 Identities = 76/302 (25%), Positives = 111/302 (36%), Gaps = 42/302 (13%)

Query: 55  DWVFEVKWDGYRLAIHIEPKGVRIITRGGHDWTHRFPAIAEATSKLGVGTAILDGEAVV- 113
           D+  E KWDG R+ +       R+ +R G + +  FP I EA    GV    +DGE +V 
Sbjct: 221 DFAAEWKWDGIRVQLANVGGARRLYSRSGDEISSAFPEIIEAADITGV----IDGELLVG 276

Query: 114 ---LDEEGRSDFGALQRSLGGRGGKRSSTE---SVFFAFDLLYFDGHDLSGTELSVRRHL 167
                      F  LQ+ L  +   R   +   +   A+D+L+    D+      VRR  
Sbjct: 277 GTMRSNRATGTFADLQQRLNRKTVSRKLMDEYPAFIRAYDILFSGERDIRPEPFRVRREA 336

Query: 168 LEGFLD---------GPTGAIQSSEEVFGDGALLEKACSMGLKGIIAKHRDWPYRSGRT- 217
           L   ++          P     S +E+     L        ++G++ K  D PY +GR  
Sbjct: 337 LSSLIEAASPQHFDLSPLVGFSSWKEL---DELRSSPPDPVIEGVMLKRLDSPYMAGRAK 393

Query: 218 GDWLKIKCLQSESFMIVGYEQSLTARGGLGS--------LLLAGRKGHDWIYVGSVGTGF 269
           G W K K        ++ Y Q     G   S        +   G  G   + VG    GF
Sbjct: 394 GPWFKWKRAPFNIDAVLMYAQ--RGHGKRSSYYSDFTFGVWAEGEDGASLVPVGKAYFGF 451

Query: 270 NTKDAEYLRKTLDRLKTSKPAVPLKGKNLVFAQPT--LIAEIEFRGWTHDGSLRHASYKG 327
              DAE   + LDR               V A+P    + E+ F G     S RH S   
Sbjct: 452 T--DAEL--EVLDRFVRDNTVERFGPVRAVRAEPDSGFVVEVAFEGLNR--STRHKSGVA 505

Query: 328 LR 329
           +R
Sbjct: 506 MR 507