Pairwise Alignments

Query, 346 a.a., ATP-dependent DNA ligase from Sinorhizobium meliloti 1021

Subject, 552 a.a., putative DNA ligase, ATP-dependent from Pseudomonas putida KT2440

 Score = 58.9 bits (141), Expect = 3e-13
 Identities = 62/193 (32%), Positives = 88/193 (45%), Gaps = 21/193 (10%)

Query: 50  PPKGPDWVFEVKWDGYRLAIHIEPKGVRIITRGGHDWTHRFPAIAEATSKLGVGTAILDG 109
           PP   DW  E KWDG R  +      + + +RG    T RFP +      L  G  +LDG
Sbjct: 231 PPS--DWQIEWKWDGIRAQVVKRDGQLWVWSRGEELVTERFPELHGLAQTLPDG-VVLDG 287

Query: 110 EAVVL------DEEGRSDFGALQRSLGGRG-GKRSSTES--VFFAFDLLYFDGHDLSGTE 160
           E +V        E     F  LQ+ +G +  GK+   ++  V  A+DLL + G D     
Sbjct: 288 EILVWKPGETETELAVQPFALLQQRIGRKTLGKKLLNDAPVVLQAYDLLEWQGEDWRSRP 347

Query: 161 LSVRRHLLEGFLD-GPTGAIQSSEEVFG-DGALL----EKACSMGLKGIIAKHRDWPYRS 214
              RR  LE  +D  P   +  S  + G D A L    E++ S+G++G++ K R+  Y  
Sbjct: 348 QHERRSQLEHLVDEHPLAPVLLSPLLQGPDWADLARQREQSRSLGVEGLMLKQREALYGV 407

Query: 215 GRTGD---WLKIK 224
           GRT D   W K K
Sbjct: 408 GRTKDMGIWWKWK 420